RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 OTOL1A6NHN0 477 aaPredicted RBP17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 LSM8O95777 96 aaKnown RBP17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MMEP08473 750 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 AVPR2P30518 371 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CDH5P33151 784 aaPredicted RBP17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SNX16P57768 344 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 COG7P83436 770 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TMEM105Q8N8V8 129 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 IPO4Q8TEX9 1081 aaKnown RBP17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SLC20A1Q8WUM9 679 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FAM149B1Q96BN6 582 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 OTUB2Q96DC9 234 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TRIM62Q9BVG3 475 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TJP2Q9UDY2 1190 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SIT1Q9Y3P8 196 aa17.04■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SLC12A8A0AV02 714 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PI15O43692 258 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GREM1O60565 184 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 STC2O76061 302 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TARSP26639 723 aaKnown RBP17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CDR2Q01850 454 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ARID5AQ03989 594 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NR1H3Q13133 447 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PTPN20Q4JDL3 420 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MSANTD2Q6P1R3 559 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 HTR3DQ70Z44 454 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FMNL3Q8IVF7 1028 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 BBS7Q8IWZ6 715 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 BAP1Q92560 729 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NELL2Q99435 816 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 OSBPL6Q9BZF3 934 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SYNCQ9H7C4 482 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 IFNKQ9P0W0 207 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MYO6Q9UM54 1294 aa17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MTF2Q9Y483 593 aaPredicted RBP17.03■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TRIOO75962 3097 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ERBB2P04626 1255 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CYP17A1P05093 508 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 HMBSP08397 361 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CCDC172P0C7W6 258 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NCAM1P13591 858 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GJA4P35212 333 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PBX1P40424 430 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NOMO3P69849 1222 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 AMPD2Q01433 879 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FMO1Q01740 532 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 OR6B2Q6IFH4 312 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TXNDC11Q6PKC3 985 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 BEND5Q7L4P6 421 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PLD4Q96BZ4 506 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SFMBT1Q9UHJ3 866 aa17.02■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NCAM2O15394 837 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 DCNP07585 359 aaKnown RBP17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 FERP16591 822 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CHRNB2P17787 502 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CORO1AP31146 461 aaKnown RBP17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 PON2Q15165 354 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 DHCR24Q15392 516 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 FIGNQ5HY92 759 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 NAA35Q5VZE5 725 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 Q6ZNB5 142 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 TOGARAM2Q6ZUX3 1019 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 FAM183BPQ6ZVS7 135 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 MSANTD4Q8NCY6 345 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CHFRQ96EP1 664 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 PIWIL1Q96J94 861 aaKnown RBP17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 DCLK3Q9C098 648 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 TTYH3Q9C0H2 523 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 POPDC2Q9HBU9 364 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ASNSD1Q9NWL6 643 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ZNF510Q9Y2H8 683 aa17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 HBS1LQ9Y450 684 aaKnown RBP17.01■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 LRRC53A6NM62 1247 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CAPN9O14815 690 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 MSI1O43347 362 aaKnown RBP17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ADH1CP00326 375 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CYP1A1P04798 512 aaPredicted RBP17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 FYNP06241 537 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 TPM3P06753 285 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 GLI1P08151 1106 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 YWHAZP63104 245 aaKnown RBP17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 TRIP4Q15650 581 aaPredicted RBP17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 EFHC1Q5JVL4 640 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 OLFML1Q6UWY5 402 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ERICH1Q86X53 443 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ZDHHC17Q8IUH5 632 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 ZNF687Q8N1G0 1237 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 DQX1Q8TE96 717 aaKnown RBP17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 CPA5Q8WXQ8 436 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 EXOC4Q96A65 974 aa17■□□□□ 0.31
MSH5-SAPCD1-206ENST00000491552 NUP58Q9BVL2 599 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms