RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 TDP1Q9NUW8 608 aa9.1□□□□□ -0.95
CMSS1-206ENST00000491299 TRPM5Q9NZQ8 1165 aa9.1□□□□□ -0.95
CMSS1-206ENST00000491299 PIAS3Q9Y6X2 628 aa9.1□□□□□ -0.95
CMSS1-206ENST00000491299 BICDL2A1A5D9 508 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 F8VP50 259 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 TGFBR3LH3BV60 316 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 SLC16A3O15427 465 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 RTN3O95197 1032 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 VNN1O95497 513 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ABL1P00519 1130 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ASS1P00966 412 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 CD72P21854 359 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DGKGP49619 791 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 CDH8P55286 799 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 AMPD2Q01433 879 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 IFRD2Q12894 506 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 PPP2R5DQ14738 602 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 IQCB1Q15051 598 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 CCDC142Q17RM4 750 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ZCWPW2Q504Y3 356 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 HSP90AA4PQ58FG1 418 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 TXNDC8Q6A555 127 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ANKRD40Q6AI12 368 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 TTI2Q6NXR4 508 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ZC3H14Q6PJT7 736 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 ALYREFQ86V81 257 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 MON1AQ86VX9 555 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 UNC93AQ86WB7 457 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DHX40Q8IX18 779 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 TTC39CQ8N584 583 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 TTC16Q8NEE8 873 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 FAM3CQ92520 227 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 EXOC4Q96A65 974 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 EEF2KMTQ96G04 330 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 SMARCD1Q96GM5 515 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 C8orf48Q96LL4 319 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DUSP9Q99956 384 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DDX23Q9BUQ8 820 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 SLC46A2Q9BY10 475 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 NIF3L1Q9GZT8 377 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 NAT10Q9H0A0 1025 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DPEP3Q9H4B8 488 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 C8orf33Q9H7E9 229 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 DMAP1Q9NPF5 467 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 SPATA6Q9NWH7 488 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 RWDD2AQ9UIY3 292 aa9.09□□□□□ -0.95
CMSS1-206ENST00000491299 NDRG2Q9UN36 371 aaKnown RBP9.09□□□□□ -0.95
CMSS1-206ENST00000491299 KIF26AQ9ULI4 1882 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 MYO16Q9Y6X6 1858 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 BECN2A8MW95 431 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 LAMTOR5O43504 91 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 PRAMEF12O95522 483 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 PFKLP17858 780 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 MRE11P49959 708 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 NDST1P52848 882 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 MLLT6P55198 1093 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 CETN1Q12798 172 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ELOAQ14241 798 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 LRRC32Q14392 662 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 NCAPHQ15003 741 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 TPD52L1Q16890 204 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 SWI5Q1ZZU3 235 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 CCDC40Q4G0X9 1142 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 SPOPLQ6IQ16 392 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ACOT1Q86TX2 421 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 FAM35AQ86V20 835 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 RALGPS2Q86X27 583 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 C1orf210Q8IVY1 113 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 NUP93Q8N1F7 819 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 FBXL13Q8NEE6 735 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 TAS1R2Q8TE23 839 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 BHMTQ93088 406 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 BPIFA3Q9BQP9 254 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ZNF518BQ9C0D4 1074 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 SMG9Q9H0W8 520 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 CYP3A43Q9HB55 503 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 METTL14Q9HCE5 456 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.08□□□□□ -0.961e-7■■■■■ 166.5
CMSS1-206ENST00000491299 KRT82Q9NSB4 513 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 SAMSN1Q9NSI8 373 aaKnown RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ARMCX3Q9UH62 379 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-206ENST00000491299 COL4A2P08572 1712 aa9.08□□□□□ -0.96
CMSS1-206ENST00000491299 ELOA3CA0A087WX78 387 aaPredicted RBP9.07□□□□□ -0.96
CMSS1-206ENST00000491299 ELOA3DA6NLF2 546 aaPredicted RBP9.07□□□□□ -0.96
CMSS1-206ENST00000491299 SMTNL1A8MU46 457 aa9.07□□□□□ -0.96
CMSS1-206ENST00000491299 CLDN5O00501 218 aa9.07□□□□□ -0.96
CMSS1-206ENST00000491299 SIN3BO75182 1162 aa9.07□□□□□ -0.96
CMSS1-206ENST00000491299 TADA3O75528 432 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms