RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	TRIM49C	P0CI26	452 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	RALA	P11233	206 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	TYR	P14679	529 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	COG7	P83436	770 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	E2F5	Q15329	346 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	ZCWPW2	Q504Y3	356 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	GPRIN1	Q7Z2K8	1008 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	PIGK	Q92643	395 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	WBP2	Q969T9	261 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	NUSAP1	Q9BXS6	441 aa	Known RBP	18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	OSER1	Q9NX31	292 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	MAPK8IP1	Q9UQF2	711 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	ZDHHC9	Q9Y397	364 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	EPG5	Q9HCE0	2579 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	MYO18A	Q92614	2054 aa	Known RBP	18.88	■□□□□ 0.61
GGA1-223	ENST00000491295		A0A1W2PQH9	124 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	NEDD8-MDP1	E9PL57	170 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	GFRA2	O00451	464 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	CYP26A1	O43174	497 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	AP5Z1	O43299	807 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	ZNF202	O95125	648 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	PRR29	P0C7W0	189 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	HOXB2	P14652	356 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	CSRP1	P21291	193 aa	Known RBP	18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	IRX4	P78413	519 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	C10orf120	Q5SQS8	335 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	ARHGAP18	Q8N392	663 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	RLN3	Q8WXF3	142 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	DCLK3	Q9C098	648 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	NMUR1	Q9HB89	426 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	NAGPA	Q9UK23	515 aa		18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.87	■□□□□ 0.61
GGA1-223	ENST00000491295	PLXND1	Q9Y4D7	1925 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CDX4	O14627	284 aa	Predicted RBP	18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	NPC1	O15118	1278 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CETN3	O15182	167 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CEACAM1	P13688	526 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CD58	P19256	250 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CHKA	P35790	457 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	ZNF132	P52740	706 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	SLC8A3	P57103	927 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	ST3GAL2	Q16842	350 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	LYSMD4	Q5XG99	296 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	PSAPL1	Q6NUJ1	521 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	SLC23A3	Q6PIS1	610 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295		Q6ZNB5	142 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	RABEPK	Q7Z6M1	372 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	TMEFF1	Q8IYR6	380 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CHPF	Q8IZ52	775 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	FBXL13	Q8NEE6	735 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CEP76	Q8TAP6	659 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	HEXIM2	Q96MH2	286 aa	Known RBP	18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	RMND1	Q9NWS8	449 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	RAB20	Q9NX57	234 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	MBD1	Q9UIS9	605 aa	Predicted RBP	18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	FBXO10	Q9UK96	956 aa		18.86	■□□□□ 0.61
GGA1-223	ENST00000491295	CACNA1B	Q00975	2339 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295		A0A1W2PQF6	199 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	EPB41	P11171	864 aa	Known RBP	18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	GABRG2	P18507	467 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	DGKG	P49619	791 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	NOVA1	P51513	510 aa	Known RBP	18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	TRIM61	Q5EBN2	209 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	TPGS1	Q6ZTW0	290 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	SCD5	Q86SK9	330 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	JAKMIP2	Q96AA8	810 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	TMEM176A	Q96HP8	235 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	GABRG3	Q99928	467 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	GTPBP4	Q9BZE4	634 aa	Known RBP	18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	MMRN2	Q9H8L6	949 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	ZDHHC4	Q9NPG8	344 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	PILRB	Q9UKJ0	227 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	HCN2	Q9UL51	889 aa		18.85	■□□□□ 0.61
GGA1-223	ENST00000491295	KMT2B	Q9UMN6	2715 aa	Predicted RBP	18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	PATE3	B3GLJ2	98 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	STC2	O76061	302 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	CISD3	P0C7P0	127 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	PTGER3	P43115	390 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	MXI1	P50539	228 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	DUOXA1	Q1HG43	343 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	ARHGAP17	Q68EM7	881 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	IPO4	Q8TEX9	1081 aa	Known RBP	18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	CISH	Q9NSE2	258 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	SLC27A6	Q9Y2P4	619 aa		18.84	■□□□□ 0.61
GGA1-223	ENST00000491295	PRRT4	C9JH25	899 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	TRIM24	O15164	1050 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	RPL6	Q02878	288 aa	Known RBP	18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	ZNF394	Q53GI3	561 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	COBLL1	Q53SF7	1204 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	RAB41	Q5JT25	222 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	SH3PXD2A	Q5TCZ1	1133 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	EGFLAM	Q63HQ2	1017 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	MIB1	Q86YT6	1006 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	FRMD1	Q8N878	549 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	ANKRD52	Q8NB46	1076 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	SLC4A11	Q8NBS3	891 aa		18.83	■□□□□ 0.6
GGA1-223	ENST00000491295	CD248	Q9HCU0	757 aa		18.83	■□□□□ 0.6

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