RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PIGFQ07326 219 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SPAG1Q07617 926 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 POSTNQ15063 836 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ZSCAN26Q16670 478 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CYP2A13Q16696 494 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 WHAMMP3Q1A5X7 153 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 DPCR1Q3MIW9 517 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MAP9Q49MG5 647 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC24Q50LG9 513 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 HSP90B2PQ58FF3 399 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 BEND6Q5SZJ8 279 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 EMC10Q5UCC4 262 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ARL6IP4Q66PJ3 421 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 TTLL5Q6EMB2 1281 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 OTUD7BQ6GQQ9 843 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GALNT17Q6IS24 598 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC70Q6NSX1 233 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 WDR93Q6P2C0 686 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CYP26C1Q6V0L0 522 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCNI2Q6ZMN8 369 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 LEKR1Q6ZMV7 388 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC129Q6ZRS4 1044 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CHST3Q7LGC8 479 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CNGA4Q8IV77 575 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC170Q8IYT3 715 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM177A1Q8N128 213 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MSANTD4Q8NCY6 345 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC148Q8NFR7 591 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CTCFLQ8NI51 663 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GOLGA5Q8TBA6 731 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 FBXO41Q8TF61 875 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 LINC00476Q8WZB0 136 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SNX19Q92543 992 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GOLGA1Q92805 767 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 VOPP1Q96AW1 172 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 IQCDQ96DY2 449 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PAGE5Q96GU1 130 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 DHTKD1Q96HY7 919 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MED15Q96RN5 788 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ORAI2Q96SN7 254 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 NEU1Q99519 415 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SMOQ99835 787 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 NACAP1Q9BZK3 213 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 EDEM3Q9BZQ6 932 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM107BQ9H098 131 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 PUS7LQ9H0K6 701 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 HSD3B7Q9H2F3 369 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 KLK15Q9H2R5 256 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 HAUS4Q9H6D7 363 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 UNKLQ9H9P5 680 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MED4Q9NPJ6 270 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CCM2LQ9NUG4 571 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 INTS13Q9NVM9 706 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 GNL3LQ9NVN8 582 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 TMEM51Q9NW97 253 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 RMND1Q9NWS8 449 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF446Q9NWS9 450 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SYBUQ9NX95 663 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 AATFQ9NY61 560 aaKnown RBP eCLIP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF14Q9UBS8 474 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ADD3Q9UEY8 706 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 LIMA1Q9UHB6 759 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 ANAPC4Q9UJX5 808 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MAN1B1Q9UKM7 699 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 MYO6Q9UM54 1294 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 COX11Q9Y6N1 276 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 SIPA1L3O60292 1781 aaPredicted RBP2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 RGPD5Q99666 1765 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CRYBG1Q9Y4K1 1723 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 USP54Q70EL1 1684 aa2.25□□□□□ -2.05
SNRNP40-207ENST00000491106 CARMIL3Q8ND23 1372 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MAST3O60307 1309 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ZMYM6O95789 1325 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 ITIH6Q6UXX5 1313 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MAP3K15Q6ZN16 1313 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MROH5Q6ZUA9 1318 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CDHR2Q9BYE9 1310 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 STK36Q9NRP7 1315 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SLIT1O75093 1534 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A087WUV0 522 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TARSL2A2RTX5 802 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CTAGE15A4D2H0 777 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 VWA3AA6NCI4 1184 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TRIM75PA6NK02 468 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 POLRMTO00411 1230 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 LAD1O00515 517 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 SH2B2O14492 632 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 POLR3GO15318 223 aaPredicted RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 GPR39O43194 453 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 GPAA1O43292 621 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TRIAP1O43715 76 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT86O43790 486 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 USO1O60763 962 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 DTNBO60941 627 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 NDUFS2O75306 463 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 HAUS5O94927 633 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 FGFR1OPO95684 399 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 TTLL1O95922 423 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 MMP1P03956 469 aa2.24□□□□□ -2.05
SNRNP40-207ENST00000491106 CTAGE8P0CG41 777 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms