RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SLC13A1Q9BZW2 595 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 NEUROG2Q9H2A3 272 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 RCOR3Q9P2K3 495 aaPredicted RBP7.61□□□□□ -1.19
NPHP3-208ENST00000490993 TRHDEQ9UKU6 1024 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 CNTN6Q9UQ52 1028 aa7.61□□□□□ -1.19
NPHP3-208ENST00000490993 EPHB2P29323 1055 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PSMC4P43686 418 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PPP1R26Q5T8A7 1209 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 STRADAQ7RTN6 431 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PSTKQ8IV42 348 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 KIRREL3Q8IZU9 778 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ATP6V0D2Q8N8Y2 350 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 JOSD2Q8TAC2 188 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 WNT8BQ93098 351 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MRPL45Q9BRJ2 306 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 SYT11Q9BT88 431 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DUSP16Q9BY84 665 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DMAP1Q9NPF5 467 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 NENFQ9UMX5 172 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 IPPQ9Y573 584 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 BRWD3Q6RI45 1802 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ADGRA2Q96PE1 1338 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 SMIM28A0A1B0GU29 152 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DUSP11O75319 330 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 CNMDO75829 334 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MOCS2O96007 188 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 RPL22P35268 128 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 FLT3P36888 993 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PPARGP37231 505 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MMP13P45452 471 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 OR1G1P47890 313 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ILF2Q12905 390 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ARHGAP17Q68EM7 881 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MAMDC4Q6UXC1 1216 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DENND5BQ6ZUT9 1274 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 IFNLR1Q8IU57 520 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 LZTR1Q8N653 840 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 LRRC40Q9H9A6 602 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 GRHL1Q9NZI5 618 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 COL11A2P13942 1736 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ATXN2Q99700 1313 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DNAJC25-GNG10A0A024R161 153 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 TRIM49D1C9J1S8 452 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ANKRD65E5RJM6 399 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 SPECC1L-ADORA2AF8WAN1 911 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 CHUKO15111 745 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 LRCH4O75427 683 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 SCNN1AP37088 669 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MATKP42679 507 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PTPN9P43378 593 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ZNF132P52740 706 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 GEMP55040 296 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ELAVL2Q12926 359 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 OLFML2BQ68BL8 750 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 OVOS1Q6IE37 1185 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 MCRS1Q96EZ8 462 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 SNRNP25Q9BV90 132 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ZDHHC18Q9NUE0 388 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 TJP2Q9UDY2 1190 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DDX20Q9UHI6 824 aaKnown RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 TCRBV7S2A1N4TA0A589 114 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ARHGAP42A6NI28 874 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 CHKAP35790 457 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 ELK3P41970 407 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 FSTL1Q12841 308 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 C15orf59Q2T9L4 293 aaPredicted RBP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 NXNQ6DKJ4 435 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 PARP9Q8IXQ6 854 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 AGGF1Q8N302 714 aaeCLIP7.6□□□□□ -1.19
NPHP3-208ENST00000490993 TTC8Q8TAM2 541 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 CALML6Q8TD86 181 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 NRDE2Q9H7Z3 1164 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 DCDC2Q9UHG0 476 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
NPHP3-208ENST00000490993 GOLGA8RI6L899 631 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 MDM4O15151 490 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 VEPH1Q14D04 833 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 NOMO1Q15155 1222 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ZNF449Q6P9G9 518 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 COLGALT1Q8NBJ5 622 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 SEC14L1Q92503 715 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 NXF3Q9H4D5 531 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 FBXO44Q9H4M3 255 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 KLC4Q9NSK0 619 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ETNK2Q9NVF9 386 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 PPARGC1AQ9UBK2 798 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 PHTF1Q9UMS5 762 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 MAGED2Q9UNF1 606 aaPredicted RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 NRXN2Q9P2S2 1712 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 CLUHO75153 1309 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ERI2A8K979 691 aaKnown RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ATP9BO43861 1147 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 GLRA3O75311 464 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 APOA4P06727 396 aa7.59□□□□□ -1.19
NPHP3-208ENST00000490993 KPNA1P52294 538 aaPredicted RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 ACTN3Q08043 901 aaPredicted RBP7.59□□□□□ -1.19
NPHP3-208ENST00000490993 STX3Q13277 289 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms