RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 TRMT1Q9NXH9 659 aaKnown RBP11.44□□□□□ -0.58
VARS2-210ENST00000490699 DNMT3BQ9UBC3 853 aaKnown RBP11.44□□□□□ -0.58
VARS2-210ENST00000490699 SLC12A6Q9UHW9 1150 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 GREB1Q4ZG55 1949 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 CHD9Q3L8U1 2897 aa11.44□□□□□ -0.58
VARS2-210ENST00000490699 ZNF638Q14966 1978 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 TMEM191CA6NGB0 347 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 TMEM110-MUSTN1A8MSY1 372 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 SPOPO43791 374 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 MTA2O94776 668 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 RFC1P35251 1148 aaPredicted RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 SLC1A1P43005 524 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 PTPN9P43378 593 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 HADHBP55084 474 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 COG7P83436 770 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 RBM10P98175 930 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 DEUP1Q05D60 604 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 EFEMP1Q12805 493 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 MESDQ14696 234 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 TCEAL1Q15170 157 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 CDO1Q16878 200 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 SLC25A52Q3SY17 297 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 ZFYVE27Q5T4F4 411 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 GPR158Q5T848 1215 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 KLHDC10Q6PID8 442 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 TMC8Q8IU68 726 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 HS6ST3Q8IZP7 471 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 CCAR2Q8N163 923 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 ZNF276Q8N554 614 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 EMC1Q8N766 993 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 TRIM58Q8NG06 486 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 RXFP2Q8WXD0 754 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 NDRG1Q92597 394 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 HLA-CQ95604 372 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 ZNF707Q96C28 371 aaPredicted RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 SLC2A13Q96QE2 648 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 APOL5Q9BWW9 433 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 SMOC2Q9H3U7 446 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 OCEL1Q9H607 264 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 ZNF334Q9HCZ1 680 aaPredicted RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.43□□□□□ -0.58
VARS2-210ENST00000490699 HCFC1R1Q9NWW0 138 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 DDIT4Q9NX09 232 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 MARCH2Q9P0N8 246 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 RASAL2Q9UJF2 1139 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 TMEM59LQ9UK28 342 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 LSM7Q9UK45 103 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 COG5Q9UP83 839 aa11.43□□□□□ -0.58
VARS2-210ENST00000490699 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
VARS2-210ENST00000490699 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
VARS2-210ENST00000490699 MYO7AQ13402 2215 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 C2CD4BA6NLJ0 364 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 M0QYT0 321 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 DPYSL4O14531 572 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 BUB1O43683 1085 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 PRPSAP2O60256 369 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 TBX10O75333 385 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 APOEP02649 317 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 F11P03951 625 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 ZDHHC11BP0C7U3 371 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 PYGBP11216 843 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 HDCP19113 662 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 KCNA5P22460 613 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 MAN1A1P33908 653 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 FLT3P36888 993 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 RPL7AP62424 266 aaKnown RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 CYP4F8P98187 520 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 ATP11AP98196 1134 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 NME3Q13232 169 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 NNTQ13423 1086 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 C11orf63Q6NUN7 778 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 MSANTD2Q6P1R3 559 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 GET4Q7L5D6 327 aaPredicted RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 STRADAQ7RTN6 431 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 SCD5Q86SK9 330 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 MAB21L3Q8N8X9 362 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 JOSD2Q8TAC2 188 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 GUCD1Q96NT3 240 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 DDX23Q9BUQ8 820 aaKnown RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 LACRTQ9GZZ8 138 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 TASP1Q9H6P5 420 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 UBE2ZQ9H832 354 aaPredicted RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
VARS2-210ENST00000490699 MTMR10Q9NXD2 777 aa11.42□□□□□ -0.58
VARS2-210ENST00000490699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
VARS2-210ENST00000490699 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms