RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	MARCH2	Q9P0N8	246 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	NOCT	Q9UK39	431 aa	Known RBP	19.45	■□□□□ 0.7
C4A-256	ENST00000490663	SIT1	Q9Y3P8	196 aa		19.45	■□□□□ 0.7
C4A-256	ENST00000490663	GREM1	O60565	184 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	STC2	O76061	302 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	CHRNB2	P17787	502 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	GJA4	P35212	333 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	RPL34	P49207	117 aa	Known RBP	19.44	■□□□□ 0.7
C4A-256	ENST00000490663	CLCN5	P51795	746 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	FAM183BP	Q6ZVS7	135 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	CACNA2D4	Q7Z3S7	1137 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	FMNL3	Q8IVF7	1028 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	ATP2A3	Q93084	1043 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	PPP1R13B	Q96KQ4	1090 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	IFNK	Q9P0W0	207 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	CEP192	Q8TEP8	1941 aa		19.44	■□□□□ 0.7
C4A-256	ENST00000490663	E2F8	A0AVK6	867 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	GRAP2	O75791	330 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	FYN	P06241	537 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	STAT1	P42224	750 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	BPIFB4	P59827	614 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	MEA1	Q16626	185 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	GAB4	Q2WGN9	574 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	PRSS33	Q8NF86	280 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	ADAM32	Q8TC27	787 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	RNF139	Q8WU17	664 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	IRGQ	Q8WZA9	623 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	C8orf33	Q9H7E9	229 aa	Predicted RBP	19.43	■□□□□ 0.7
C4A-256	ENST00000490663	FBRSL1	Q9HCM7	1045 aa	Known RBP	19.43	■□□□□ 0.7
C4A-256	ENST00000490663	DLGAP2	Q9P1A6	1054 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	NAALADL1	Q9UQQ1	740 aa		19.43	■□□□□ 0.7
C4A-256	ENST00000490663	SPAG17	Q6Q759	2223 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	ANTXRL	A6NF34	631 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	FBXO21	O94952	628 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	NFATC1	O95644	943 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	KLKB1	P03952	638 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	CORO1A	P31146	461 aa	Known RBP	19.42	■□□□□ 0.7
C4A-256	ENST00000490663	ACADSB	P45954	432 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	PITX1	P78337	314 aa	Predicted RBP	19.42	■□□□□ 0.7
C4A-256	ENST00000490663	FMO1	Q01740	532 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	FZD5	Q13467	585 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	NR1I3	Q14994	352 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	DHCR24	Q15392	516 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	LY6G5C	Q5SRR4	150 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	NAA35	Q5VZE5	725 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	OR6B2	Q6IFH4	312 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	KLHDC10	Q6PID8	442 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	C12orf40	Q86WS4	652 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	RALGPS2	Q86X27	583 aa	Predicted RBP	19.42	■□□□□ 0.7
C4A-256	ENST00000490663	ZNF687	Q8N1G0	1237 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	SCML4	Q8N228	414 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	BHMT	Q93088	406 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	LHX5	Q9H2C1	402 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	ABCC13	Q9NSE7	274 aa		19.42	■□□□□ 0.7
C4A-256	ENST00000490663	LSM7	Q9UK45	103 aa	Known RBP	19.42	■□□□□ 0.7
C4A-256	ENST00000490663	RALGAPA1	Q6GYQ0	2036 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	MAN2B1	O00754	1011 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	NCAM1	P13591	858 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	UBASH3A	P57075	661 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	NOMO3	P69849	1222 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	KDSR	Q06136	332 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	GOLGA8F	Q08AF8	430 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	GOLGA8DP	Q0D2H9	430 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	MESP2	Q0VG99	397 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	SYPL2	Q5VXT5	272 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	E4F1	Q66K89	784 aa	Predicted RBP	19.41	■□□□□ 0.7
C4A-256	ENST00000490663	RHBDF2	Q6PJF5	856 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663		Q6ZS52	159 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	PHLDB2	Q86SQ0	1253 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	TADA2B	Q86TJ2	420 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	TMEM110	Q86TL2	294 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	SFTPA1	Q8IWL2	248 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	ZNF276	Q8N554	614 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	STK32A	Q8WU08	396 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	CPA5	Q8WXQ8	436 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	BAP1	Q92560	729 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	P2RY11	Q96G91	374 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	CDK5RAP1	Q96SZ6	601 aa	Known RBP	19.41	■□□□□ 0.7
C4A-256	ENST00000490663	SYNC	Q9H7C4	482 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	STRIP2	Q9ULQ0	834 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	CEP83	Q9Y592	693 aa		19.41	■□□□□ 0.7
C4A-256	ENST00000490663	LRRC53	A6NM62	1247 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	SLC9A3R1	O14745	358 aa	Predicted RBP	19.4	■□□□□ 0.7
C4A-256	ENST00000490663	CAVIN2	O95810	425 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	OPRD1	P41143	372 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	SLC6A11	P48066	632 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	FSTL4	Q6MZW2	842 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	MSANTD2	Q6P1R3	559 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663		Q6ZNB5	142 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	TPGS1	Q6ZTW0	290 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	HTR3D	Q70Z44	454 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	TMEM25	Q86YD3	366 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	DENND1C	Q8IV53	801 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	ADGRG2	Q8IZP9	1017 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	NAT16	Q8N8M0	369 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	DTWD2	Q8NBA8	298 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	TMEM35B	Q8NCS4	154 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	DQX1	Q8TE96	717 aa	Known RBP	19.4	■□□□□ 0.7
C4A-256	ENST00000490663	GOLGA1	Q92805	767 aa		19.4	■□□□□ 0.7
C4A-256	ENST00000490663	PCDHB18P	Q96TA0	734 aa		19.4	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms