RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CHMP6Q96FZ7 201 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PGM2Q96G03 612 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 WNK4Q96J92 1243 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC42Q96M95 316 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 XPO6Q96QU8 1125 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 RNF41Q9H4P4 317 aaPredicted RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 RABEP2Q9H5N1 569 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 IPPKQ9H8X2 491 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PCDH18Q9HCL0 1135 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 EPB41L5Q9HCM4 733 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 MCM9Q9NXL9 1143 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ETAA1Q9NY74 926 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF70Q9UC06 446 aaPredicted RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 CNOT8Q9UFF9 292 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 PFDN2Q9UHV9 154 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 HACL1Q9UJ83 578 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TTC7AQ9ULT0 858 aaPredicted RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 NFU1Q9UMS0 254 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 RPL26L1Q9UNX3 145 aaKnown RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 COA3Q9Y2R0 106 aaPredicted RBP3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 TNKSO95271 1327 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 FAM205AQ6ZU69 1335 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 UTRNP46939 3433 aa3.69□□□□□ -1.82
CRNKL1-203ENST00000490258 ROBO3Q96MS0 1386 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 GPR75-ASB3A0A0A6YYF3 556 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ESYT3A0FGR9 886 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 EME2A4GXA9 379 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM49BA6NDI0 452 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ZSCAN5CA6NGD5 496 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF561-AS1K7EIQ3 104 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 O00370 1275 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 EPHB6O15197 1021 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 RAD51CO43502 376 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 NCK2O43639 380 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SH3BP5O60239 455 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TLR2O60603 784 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 BBOX1O75936 387 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SNUPNO95149 360 aaKnown RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 NPTXRO95502 500 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 IL18BPO95998 194 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SERPING1P05155 500 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CKMP06732 381 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 PLEKP08567 350 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 VIMP08670 466 aaKnown RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 PECAM1P16284 738 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 FERP16591 822 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 FAHP16930 419 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CCND1P24385 295 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ALDH1B1P30837 517 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SHMT1P34896 483 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC16A2P36021 539 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 STAT6P42226 847 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC1A4P43007 532 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MAGEA1P43355 309 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MMP13P45452 471 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 GCLCP48506 637 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 KLK7P49862 253 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 RPS6KA3P51812 740 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 NCALDP61601 193 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TROAPQ12815 778 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MYO1EQ12965 1108 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TRAF1Q13077 416 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ORC2Q13416 577 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TUSC3Q13454 348 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 NAA25Q14CX7 972 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 WTAPQ15007 396 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 RBBP5Q15291 538 aaKnown RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 PDCD2Q16342 344 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MAN2A1Q16706 1144 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 C4orf46Q504U0 113 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 C10orf76Q5T2E6 689 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 AP1ARQ63HQ0 302 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CAPRIN2Q6IMN6 1127 aaKnown RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CENPPQ6IPU0 288 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MFSD5Q6N075 450 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MFSD6Q6ZSS7 791 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ASRGL1Q7L266 308 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 MAMDC2Q7Z304 686 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 KRT26Q7Z3Y9 468 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SLFN11Q7Z7L1 901 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CROCCP2Q86T23 111 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 HOOK3Q86VS8 718 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SCUBE1Q8IWY4 988 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SPICE1Q8N0Z3 855 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 RASGEF1CQ8N431 466 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 TEX9Q8N6V9 391 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 GBP7Q8N8V2 638 aaPredicted RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 LRRC57Q8N9N7 239 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC63Q8NA47 563 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ACER1Q8TDN7 264 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SH3TC2Q8TF17 1288 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ATP8B4Q8TF62 1192 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 VOPP1Q96AW1 172 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 SCLYQ96I15 445 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CLMNQ96JQ2 1002 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 PBKQ96KB5 322 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 CNOT6LQ96LI5 555 aaKnown RBP3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 C8orf48Q96LL4 319 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 AK8Q96MA6 479 aa3.68□□□□□ -1.82
CRNKL1-203ENST00000490258 ZSWIM3Q96MP5 696 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms