RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 CHPFQ8IZ52 775 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 RGL4Q8IZJ4 473 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 OR6B3Q8NGW1 331 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 BAHD1Q8TBE0 780 aaPredicted RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 NOC3LQ8WTT2 800 aaKnown RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 WBP2Q969T9 261 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 XPO6Q96QU8 1125 aaKnown RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 ACOX2Q99424 681 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 CCSER2Q9H7U1 834 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 DMAP1Q9NPF5 467 aaPredicted RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 PANK4Q9NVE7 773 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 DNAJC17Q9NVM6 304 aaKnown RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 HSPBP1Q9NZL4 362 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 USP36Q9P275 1121 aaKnown RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 WDR35Q9P2L0 1181 aa8.68□□□□□ -1.02
USP39-216ENST00000490193 CHORDC1Q9UHD1 332 aaPredicted RBP8.68□□□□□ -1.02
USP39-216ENST00000490193 BPTFQ12830 3046 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 A8MXQ7 604 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TULP1O00294 542 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 NPC1O15118 1278 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
USP39-216ENST00000490193 KALRNO60229 2985 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 ATP8B3O60423 1300 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TLR5O60602 858 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 NDUFS2O75306 463 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 IGLV3-19P01714 112 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CISD3P0C7P0 127 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TYRP14679 529 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CD6P30203 668 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 ATICP31939 592 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 HOXD13P35453 343 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TNNC1P63316 161 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 IFRD2Q12894 506 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 ENPP2Q13822 863 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 PSMD6Q15008 389 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 SNRNP35Q16560 246 aaKnown RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 WDR72Q3MJ13 1102 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 EPM2AIP1Q7L775 607 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 TMPRSS7Q7RTY8 843 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 SLCO6A1Q86UG4 719 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CCDC65Q8IXS2 484 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 PNPLA1Q8N8W4 532 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CADM4Q8NFZ8 388 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 SCAMP5Q8TAC9 235 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 MDM1Q8TC05 714 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 SCFD1Q8WVM8 642 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 BBC3Q96PG8 261 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 KCNK16Q96T55 309 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CGRRF1Q99675 332 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 BBS2Q9BXC9 721 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 KLF16Q9BXK1 252 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 CSNK1G1Q9HCP0 422 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CD93Q9NPY3 652 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CYLDQ9NQC7 956 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TOR4AQ9NXH8 423 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 WSB2Q9NYS7 404 aaPredicted RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 GMIPQ9P107 970 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 FBXO10Q9UK96 956 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 SMC3Q9UQE7 1217 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 PCDHGB2Q9Y5G2 931 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 CLIC4Q9Y696 253 aa8.67□□□□□ -1.02
USP39-216ENST00000490193 FLNBO75369 2602 aaKnown RBP8.67□□□□□ -1.02
USP39-216ENST00000490193 TMEM131Q92545 1883 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 A0A087X0B3 334 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 NEDD8-MDP1E9PL57 170 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 TGFB1I1O43294 461 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 CER1O95813 267 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 IRF1P10914 325 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 TNNI1P19237 187 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 STAT6P42226 847 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 SNRPFP62306 86 aaKnown RBP8.66□□□□□ -1.02
USP39-216ENST00000490193 CYP24A1Q07973 514 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 FUT11Q495W5 492 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 KLHDC10Q6PID8 442 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 FUKQ8N0W3 1084 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 ZMIZ2Q8NF64 920 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 C1orf216Q8TAB5 229 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 ZNF507Q8TCN5 953 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 SYAP1Q96A49 352 aaPredicted RBP8.66□□□□□ -1.02
USP39-216ENST00000490193 SMARCD1Q96GM5 515 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 TNIP3Q96KP6 325 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 CLIC6Q96NY7 704 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 SLC6A17Q9H1V8 727 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 FBXO44Q9H4M3 255 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 ITM2CQ9NQX7 267 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP39-216ENST00000490193 AGPAT3Q9NRZ7 376 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 RAXQ9Y2V3 346 aa8.66□□□□□ -1.02
USP39-216ENST00000490193 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms