RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 GYPCP04921 128 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CALB1P05937 261 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 GLULP15104 373 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 GBP1P32455 592 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 ZNF75DP51815 510 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 NOMO3P69849 1222 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 NR1H3Q13133 447 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 NAA35Q5VZE5 725 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 C1orf228Q6PIY5 440 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 VITQ6UXI7 678 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 ARCQ7LC44 396 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CPA5Q8WXQ8 436 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 DNASE1L2Q92874 299 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 EXOC4Q96A65 974 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 FAM149B1Q96BN6 582 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 SHDQ96IW2 340 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 SLC22A12Q96S37 553 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 OSER1Q9NX31 292 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 RRN3Q9NYV6 651 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 MARCH2Q9P0N8 246 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.33
COL4A5-206ENST00000489230 DUSP12Q9UNI6 340 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CPQQ9Y646 472 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 CACNA1HO95180 2353 aa13.02□□□□□ -0.33
COL4A5-206ENST00000489230 MYH10P35580 1976 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 DOCK6Q96HP0 2047 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 AKR1B15C9JRZ8 316 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-206ENST00000489230 PIK3R2O00459 728 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 TBX18O95935 607 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 NCAM1P13591 858 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 MMP8P22894 467 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 GDI1P31150 447 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 GPC5P78333 572 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 CENPCQ03188 943 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 MTA1Q13330 715 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 HTR3DQ70Z44 454 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
COL4A5-206ENST00000489230 DNAJC7Q99615 494 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 PLA2G2FQ9BZM2 168 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 SMG9Q9H0W8 520 aaKnown RBP13.01□□□□□ -0.33
COL4A5-206ENST00000489230 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
COL4A5-206ENST00000489230 ADAM22Q9P0K1 906 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 HBS1LQ9Y450 684 aaKnown RBP13.01□□□□□ -0.33
COL4A5-206ENST00000489230 DENND4AQ7Z401 1863 aa13.01□□□□□ -0.33
COL4A5-206ENST00000489230 ZFHX2Q9C0A1 2572 aaPredicted RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 GREB1Q4ZG55 1949 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 GOLGA6L6A8MZA4 724 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 PROB1E7EW31 1015 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 PRAMEF12O95522 483 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 ERBB2P04626 1255 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 SKILP12757 684 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 NOS2P35228 1153 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 HARS2P49590 506 aaKnown RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 PGFP49763 221 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 CDK17Q00537 523 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 ARID5BQ14865 1188 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 MTF1Q14872 753 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 PTPN20Q4JDL3 420 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 SLC26A9Q7LBE3 791 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 BHLHA9Q7RTU4 235 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 ZNF571Q7Z3V5 609 aaPredicted RBP13□□□□□ -0.33
COL4A5-206ENST00000489230 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 EDEM1Q92611 657 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 ATP2A3Q93084 1043 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 TRIM11Q96F44 468 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 MSANTD3Q96H12 275 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 PCDHB18PQ96TA0 734 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
COL4A5-206ENST00000489230 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 GKN1Q9NS71 199 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 FBXL21Q9UKT6 434 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 CCL26Q9Y258 94 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 CFAP54Q96N23 3096 aa13□□□□□ -0.33
COL4A5-206ENST00000489230 SLC12A8A0AV02 714 aa12.99□□□□□ -0.33
COL4A5-206ENST00000489230 ANKRD62A6NC57 917 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms