RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 DEC1Q9P2X7 70 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 KIAA1257Q9ULG3 409 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 MYH10P35580 1976 aa13.19□□□□□ -0.3
SRRM1-216ENST00000489130 TBC1D3BA6NDS4 549 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 SGK1O00141 431 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TULP2O00295 520 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
SRRM1-216ENST00000489130 ADAM23O75077 832 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 EPN2O95208 641 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 ZBED1O96006 694 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 PAEPP09466 180 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 VDRP11473 427 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TYRP14679 529 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TIE1P35590 1138 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TKTL1P51854 596 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 UBE2HP62256 183 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 COG7P83436 770 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
SRRM1-216ENST00000489130 CETN1Q12798 172 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 PLK5Q496M5 336 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 PKDCCQ504Y2 493 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 EMC10Q5UCC4 262 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 NUDT18Q6ZVK8 323 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 DGLUCYQ7Z3D6 616 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 MIB1Q86YT6 1006 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
SRRM1-216ENST00000489130 MDGA1Q8NFP4 955 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 NT5C1BQ96P26 610 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 HESX1Q9UBX0 185 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
SRRM1-216ENST00000489130 ZNF510Q9Y2H8 683 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
SRRM1-216ENST00000489130 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
SRRM1-216ENST00000489130 ATG2BQ96BY7 2078 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 KLF8O95600 359 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 KLKB1P03952 638 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 HNRNPLP14866 589 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 CD19P15391 556 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 ATXN1P54253 815 aaKnown RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 STX17P56962 302 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 YWHAGP61981 247 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 GCNT1Q02742 428 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 EFEMP1Q12805 493 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 ANO7Q6IWH7 933 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 TRMT11Q7Z4G4 463 aaKnown RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 C11orf74Q86VG3 221 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 PPM1KQ8N3J5 372 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 NETO1Q8TDF5 533 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 KCTD13Q8WZ19 329 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 KAT5Q92993 513 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 XPO6Q96QU8 1125 aaKnown RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
SRRM1-216ENST00000489130 RASAL2Q9UJF2 1139 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 EML5Q05BV3 1969 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 CEP250Q9BV73 2442 aa13.17□□□□□ -0.3
SRRM1-216ENST00000489130 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 DCLK1O15075 740 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 TRIM24O15164 1050 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ZNF132P52740 706 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 KCNH2Q12809 1159 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 STILQ15468 1287 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ELF2Q15723 593 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 USP39Q53GS9 565 aaKnown RBP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 SCML4Q8N228 414 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 RTKNQ9BST9 563 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 TPSD1Q9BZJ3 242 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
SRRM1-216ENST00000489130 ZDHHC4Q9NPG8 344 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
SRRM1-216ENST00000489130 MARCH2Q9P0N8 246 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms