RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PRR23BQ6ZRT6 265 aa26.22■■□□□ 1.79
HMGN1-217ENST00000489072 KCTD13Q8WZ19 329 aa26.22■■□□□ 1.79
HMGN1-217ENST00000489072 CNTN6Q9UQ52 1028 aa26.22■■□□□ 1.79
HMGN1-217ENST00000489072 A0A0A0MRY4 1105 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 TULP3O75386 442 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 KLKB1P03952 638 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 APODP05090 189 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 CNR2P34972 360 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 GRIA2P42262 883 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 SIM2Q14190 667 aaPredicted RBP26.21■■□□□ 1.79
HMGN1-217ENST00000489072 PMF1Q6P1K2 205 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 KIAA2013Q8IYS2 634 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 CAMKK1Q8N5S9 505 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 CCDC26Q8TAB7 109 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 SLC35F5Q8WV83 523 aa26.21■■□□□ 1.79
HMGN1-217ENST00000489072 SECISBP2LQ93073 1101 aaKnown RBP26.21■■□□□ 1.79
HMGN1-217ENST00000489072 UBE2TQ9NPD8 197 aaPredicted RBP26.21■■□□□ 1.79
HMGN1-217ENST00000489072 CCDC163A0A0D9SF12 145 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.2■■□□□ 1.78
HMGN1-217ENST00000489072 M0QYV0 167 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 TRIM24O15164 1050 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 HMBSP08397 361 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 RGS7P49802 495 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 APBA1Q02410 837 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 EMC10Q5UCC4 262 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 BTBD8Q5XKL5 378 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 GJB7Q6PEY0 223 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 TRIM65Q6PJ69 517 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 TPGS1Q6ZTW0 290 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 P2RY11Q96G91 374 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 IPO9Q96P70 1041 aaKnown RBP26.2■■□□□ 1.78
HMGN1-217ENST00000489072 MARK1Q9P0L2 795 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 MARCH2Q9P0N8 246 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 DCHS1Q96JQ0 3298 aa26.2■■□□□ 1.78
HMGN1-217ENST00000489072 YJEFN3A6XGL0 299 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 E7ENQ6 273 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 LCP1P13796 627 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 SLC9A1P19634 815 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 COG7P83436 770 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 STILQ15468 1287 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 RSRC2Q7L4I2 434 aaKnown RBP26.19■■□□□ 1.78
HMGN1-217ENST00000489072 SIX6OS1Q8N1H7 587 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 CCDC33Q8N5R6 958 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 RAB23Q9ULC3 237 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 MMP17Q9ULZ9 603 aa26.19■■□□□ 1.78
HMGN1-217ENST00000489072 NEDD8-MDP1E9PL57 170 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 PIK3R2O00459 728 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 KRT5P13647 590 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 TNFRSF4P43489 277 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 KIR2DL1P43626 348 aaPredicted RBP26.18■■□□□ 1.78
HMGN1-217ENST00000489072 MTIF2P46199 727 aaKnown RBP26.18■■□□□ 1.78
HMGN1-217ENST00000489072 DAOAP59103 153 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 MRPS21P82921 87 aaKnown RBP26.18■■□□□ 1.78
HMGN1-217ENST00000489072 TPD52L1Q16890 204 aaPredicted RBP26.18■■□□□ 1.78
HMGN1-217ENST00000489072 LAIR1Q6GTX8 287 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 SCML4Q8N228 414 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 ALLCQ8N6M5 410 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 BBS2Q9BXC9 721 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 THAP9Q9H5L6 903 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 ZDHHC4Q9NPG8 344 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 CNGB3Q9NQW8 809 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 DEC1Q9P2X7 70 aa26.18■■□□□ 1.78
HMGN1-217ENST00000489072 RALGAPA1Q6GYQ0 2036 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 SLC12A8A0AV02 714 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 CACNG3O60359 315 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 APBB3O95704 486 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 TYRP14679 529 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 CORO1AP31146 461 aaKnown RBP26.17■■□□□ 1.78
HMGN1-217ENST00000489072 TIE1P35590 1138 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 BSPRYQ5W0U4 402 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 GBP6Q6ZN66 633 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 IL17RCQ8NAC3 791 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 GAB3Q8WWW8 586 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 EDEM1Q92611 657 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 DNAJC17Q9NVM6 304 aaKnown RBP26.17■■□□□ 1.78
HMGN1-217ENST00000489072 STRIP2Q9ULQ0 834 aa26.17■■□□□ 1.78
HMGN1-217ENST00000489072 TBC1D3BA6NDS4 549 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 AXIN1O15169 862 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 KLF8O95600 359 aaPredicted RBP26.16■■□□□ 1.78
HMGN1-217ENST00000489072 HNRNPLP14866 589 aaKnown RBP eCLIP26.16■■□□□ 1.78
HMGN1-217ENST00000489072 TGM1P22735 817 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 ERCC5P28715 1186 aaPredicted RBP26.16■■□□□ 1.78
HMGN1-217ENST00000489072 CEP68Q76N32 757 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 TERB1Q8NA31 727 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 TXNDC5Q8NBS9 432 aaKnown RBP26.16■■□□□ 1.78
HMGN1-217ENST00000489072 GPT2Q8TD30 523 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 CLEC4CQ8WTT0 213 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 DCLK3Q9C098 648 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 WDR35Q9P2L0 1181 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 GMEB2Q9UKD1 530 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 AGO1Q9UL18 857 aaKnown RBP26.16■■□□□ 1.78
HMGN1-217ENST00000489072 HCN2Q9UL51 889 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 ZNF510Q9Y2H8 683 aa26.16■■□□□ 1.78
HMGN1-217ENST00000489072 GTPBP10A4D1E9 387 aaKnown RBP26.15■■□□□ 1.78
HMGN1-217ENST00000489072 SGK1O00141 431 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 RPP40O75818 363 aaKnown RBP26.15■■□□□ 1.78
HMGN1-217ENST00000489072 PON1P27169 355 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 MFAP3P55082 362 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 EXOC3L4Q17RC7 722 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 GRAMD4Q6IC98 578 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms