RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CDK5RAP1Q96SZ6 601 aaKnown RBP24.17■■□□□ 1.46
COL9A3-213ENST00000489045 ARRDC1-AS1Q9H2J1 176 aa24.17■■□□□ 1.46
COL9A3-213ENST00000489045 ZDHHC4Q9NPG8 344 aa24.17■■□□□ 1.46
COL9A3-213ENST00000489045 TBC1D3BA6NDS4 549 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 SGK1O00141 431 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 DCLK1O15075 740 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 TRIM24O15164 1050 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 PMM2O15305 246 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 STC2O76061 302 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 HNRNPLP14866 589 aaKnown RBP eCLIP24.16■■□□□ 1.46
COL9A3-213ENST00000489045 TKTL1P51854 596 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 STX17P56962 302 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 PDE4CQ08493 712 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 PAK1Q13153 545 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 PLK5Q496M5 336 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 HSF5Q4G112 596 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-213ENST00000489045 PREPLQ4J6C6 727 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-213ENST00000489045 Q6ZNB5 142 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 RASSF3Q86WH2 238 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 ARHGAP18Q8N392 663 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 TERB1Q8NA31 727 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 BBS2Q9BXC9 721 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 DNAJC17Q9NVM6 304 aaKnown RBP24.16■■□□□ 1.46
COL9A3-213ENST00000489045 MARK1Q9P0L2 795 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 HESX1Q9UBX0 185 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 THADAQ6YHU6 1953 aa24.16■■□□□ 1.46
COL9A3-213ENST00000489045 XPO1O14980 1071 aaKnown RBP24.15■■□□□ 1.46
COL9A3-213ENST00000489045 VDRP11473 427 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 TYRP14679 529 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 YWHAGP61981 247 aaKnown RBP eCLIP24.15■■□□□ 1.46
COL9A3-213ENST00000489045 BST2Q10589 180 aaKnown RBP24.15■■□□□ 1.46
COL9A3-213ENST00000489045 EFEMP1Q12805 493 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 C10orf76Q5T2E6 689 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 MDGA1Q8NFP4 955 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 CNOT6LQ96LI5 555 aaKnown RBP24.15■■□□□ 1.46
COL9A3-213ENST00000489045 ULBP1Q9BZM6 244 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 DUSP15Q9H1R2 295 aaPredicted RBP24.15■■□□□ 1.46
COL9A3-213ENST00000489045 NUP205Q92621 2012 aa24.15■■□□□ 1.46
COL9A3-213ENST00000489045 O00370 1275 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 CACNG3O60359 315 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 ZBED1O96006 694 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 CETN1Q12798 172 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 CCDC6Q16204 474 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 EOGTQ5NDL2 527 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 GRAMD4Q6IC98 578 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 TMEM270Q6UE05 265 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 PPM1KQ8N3J5 372 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 UBA3Q8TBC4 463 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 KAT5Q92993 513 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 XPO6Q96QU8 1125 aaKnown RBP24.14■■□□□ 1.45
COL9A3-213ENST00000489045 LRRC4Q9HBW1 653 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 WDR35Q9P2L0 1181 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 INVSQ9Y283 1065 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 PCDHB4Q9Y5E5 795 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 ABCA7Q8IZY2 2146 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 PLXND1Q9Y4D7 1925 aa24.14■■□□□ 1.45
COL9A3-213ENST00000489045 P4HA2O15460 535 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 ADAM23O75077 832 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 ALDH1A2O94788 518 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 KLKB1P03952 638 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 HMBSP08397 361 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 ATXN1P54253 815 aaKnown RBP24.13■■□□□ 1.45
COL9A3-213ENST00000489045 COG7P83436 770 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 ELF2Q15723 593 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 USP39Q53GS9 565 aaKnown RBP24.13■■□□□ 1.45
COL9A3-213ENST00000489045 PM20D1Q6GTS8 502 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 NUDT18Q6ZVK8 323 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 RSRC2Q7L4I2 434 aaKnown RBP24.13■■□□□ 1.45
COL9A3-213ENST00000489045 BHLHA9Q7RTU4 235 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 TRIM59Q8IWR1 403 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 ZNF513Q8N8E2 541 aaPredicted RBP24.13■■□□□ 1.45
COL9A3-213ENST00000489045 LMO3Q8TAP4 145 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 NDRG1Q92597 394 aaKnown RBP24.13■■□□□ 1.45
COL9A3-213ENST00000489045 KIAA1257Q9ULG3 409 aa24.13■■□□□ 1.45
COL9A3-213ENST00000489045 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.12■■□□□ 1.45
COL9A3-213ENST00000489045 GNA14O95837 355 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 PAEPP09466 180 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 SETSIPP0DME0 302 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 CORO1AP31146 461 aaKnown RBP24.12■■□□□ 1.45
COL9A3-213ENST00000489045 GBP1P32455 592 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 UBE2HP62256 183 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 ADIGQ0VDE8 80 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 KCNH2Q12809 1159 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 SF3A2Q15428 464 aaKnown RBP24.12■■□□□ 1.45
COL9A3-213ENST00000489045 ARHGEF19Q8IW93 802 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 NETO1Q8TDF5 533 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 TFAP2BQ92481 460 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 BHMTQ93088 406 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 SRRTQ9BXP5 876 aaKnown RBP24.12■■□□□ 1.45
COL9A3-213ENST00000489045 POLMQ9NP87 494 aaPredicted RBP24.12■■□□□ 1.45
COL9A3-213ENST00000489045 MARCH2Q9P0N8 246 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 HCN2Q9UL51 889 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 STRIP2Q9ULQ0 834 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 ZNF510Q9Y2H8 683 aa24.12■■□□□ 1.45
COL9A3-213ENST00000489045 MED19A0JLT2 244 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 GDF9O60383 454 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 FOXD2O60548 495 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 RHOBTB1O94844 696 aa24.11■■□□□ 1.45
COL9A3-213ENST00000489045 MARSP56192 900 aaKnown RBP24.11■■□□□ 1.45
COL9A3-213ENST00000489045 CAMK4Q16566 473 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms