RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMEM65Q6PI78 240 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 ZNF813Q6ZN06 617 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 CCDC28AQ8IWP9 274 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 C12orf76Q8N812 135 aaPredicted RBP4.36□□□□□ -1.71
RFC4-213ENST00000489028 WDR24Q96S15 920 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 ZBTB26Q9HCK0 441 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 TMEM8AQ9HCN3 771 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 FNIP2Q9P278 1114 aa4.36□□□□□ -1.71
RFC4-213ENST00000489028 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 KCNU1A8MYU2 1149 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 RASA4BC9J798 803 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 CLIC1O00299 241 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 FCHO1O14526 889 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 FYB1O15117 783 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 RASA4O43374 803 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 ATP5F1P24539 256 aaPredicted RBP4.35□□□□□ -1.71
RFC4-213ENST00000489028 GPS1Q13098 491 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 MFSD13AQ14CX5 517 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 SLC35G1Q2M3R5 365 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 FAXCQ5TGI0 409 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 PAPD7Q5XG87 772 aaKnown RBP4.35□□□□□ -1.71
RFC4-213ENST00000489028 DENND2CQ68D51 928 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 IL31Q6EBC2 164 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 MIS18BP1Q6P0N0 1132 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 CNGA4Q8IV77 575 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.35□□□□□ -1.71
RFC4-213ENST00000489028 IGFBPL1Q8WX77 278 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 RIPOR3Q96MK2 946 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 MAGEB5Q9BZ81 275 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 PCDHAC1Q9H158 963 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 USP29Q9HBJ7 922 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 ARNT2Q9HBZ2 717 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 STARD7Q9NQZ5 370 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 ZMYND8Q9ULU4 1186 aaPredicted RBP4.35□□□□□ -1.71
RFC4-213ENST00000489028 FZD4Q9ULV1 537 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 MAN2B2Q9Y2E5 1009 aa4.35□□□□□ -1.71
RFC4-213ENST00000489028 CYP2D7A0A087X1C5 515 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 C16orf96A6NNT2 1141 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 E5RJQ4 531 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 TOP3BO95985 862 aaKnown RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 PECAM1P16284 738 aaPredicted RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 GALNSP34059 522 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 NEK3P51956 506 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 TBX4P57082 545 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 RAE1P78406 368 aaKnown RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 TXNL4AP83876 142 aaKnown RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 DNASE1L3Q13609 305 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 HLTFQ14527 1009 aaKnown RBP eCLIP4.34□□□□□ -1.71
RFC4-213ENST00000489028 ZNF268Q14587 947 aaPredicted RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 ARL13BQ3SXY8 428 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 Q4G0T1 1027 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 ARHGAP15Q53QZ3 475 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 HSP90AB2PQ58FF8 381 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 FAM209BQ5JX69 171 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 TMTC4Q5T4D3 741 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 C11orf87Q6NUJ2 197 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 RANBP10Q6VN20 620 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 BEND5Q7L4P6 421 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 GLIS1Q8NBF1 620 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 MAP4K1Q92918 833 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 VPS50Q96JG6 964 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 HS6ST2Q96MM7 605 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 SPRTNQ9H040 489 aaPredicted RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 NRIP3Q9NQ35 241 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 GEMIN8Q9NWZ8 242 aaKnown RBP4.34□□□□□ -1.71
RFC4-213ENST00000489028 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 PHTF1Q9UMS5 762 aa4.34□□□□□ -1.71
RFC4-213ENST00000489028 FAM234BA2RU67 622 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 PRC1O43663 620 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 COQ9O75208 318 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 FGF18O76093 207 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
RFC4-213ENST00000489028 EGR1P18146 543 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 DRD1P21728 446 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 SLC5A2P31639 672 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 KCNJ12Q14500 433 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 SLC5A9Q2M3M2 681 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 TMEM196Q5HYL7 178 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.33□□□□□ -1.72
RFC4-213ENST00000489028 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 FAM90A2PQ658T7 463 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 MRNIPQ6NTE8 343 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 USP17L6PQ6QN14 398 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 DPP9Q86TI2 863 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 P3H2Q8IVL5 708 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 TXLNBQ8N3L3 684 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 OR2C3Q8N628 320 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 OSR1Q8TAX0 266 aaPredicted RBP4.33□□□□□ -1.72
RFC4-213ENST00000489028 SMG7Q92540 1137 aaKnown RBP4.33□□□□□ -1.72
RFC4-213ENST00000489028 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
RFC4-213ENST00000489028 ZCWPW1Q9H0M4 648 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 RGL1Q9NZL6 768 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 PCDHB2Q9Y5E7 798 aa4.33□□□□□ -1.72
RFC4-213ENST00000489028 OR2W5A6NFC9 320 aa4.32□□□□□ -1.72
RFC4-213ENST00000489028 M0QZQ0 153 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms