RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 PATE3B3GLJ2 98 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 TRIM24O15164 1050 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 RARGP13631 454 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 TYRP14679 529 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 CD58P19256 250 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 NTSR1P30989 418 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 DPP6P42658 865 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 KRT39Q6A163 491 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 CCDC186Q7Z3E2 898 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 TADA2BQ86TJ2 420 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 TTC39CQ8N584 583 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 MMRN2Q9H8L6 949 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 HCN2Q9UL51 889 aa27.37■■□□□ 1.97
RNF220-216ENST00000488865 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 NEDD8-MDP1E9PL57 170 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 HOXB2P14652 356 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 IRX4P78413 519 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 EDRF1Q3B7T1 1238 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 SYT12Q8IV01 421 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 TMEFF1Q8IYR6 380 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 FRMD1Q8N878 549 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 USP3Q9Y6I4 520 aa27.36■■□□□ 1.97
RNF220-216ENST00000488865 CDX4O14627 284 aaPredicted RBP27.35■■□□□ 1.97
RNF220-216ENST00000488865 ZNF202O95125 648 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 C10orf120Q5SQS8 335 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 PPP1R26Q5T8A7 1209 aaPredicted RBP27.35■■□□□ 1.97
RNF220-216ENST00000488865 PSAPL1Q6NUJ1 521 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 Q6ZNB5 142 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 TPGS1Q6ZTW0 290 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 CDK5RAP1Q96SZ6 601 aaKnown RBP27.35■■□□□ 1.97
RNF220-216ENST00000488865 GOLPH3LQ9H4A5 285 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 CLIC5Q9NZA1 410 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 NAGPAQ9UK23 515 aa27.35■■□□□ 1.97
RNF220-216ENST00000488865 TNRC6BQ9UPQ9 1833 aaKnown RBP27.34■■□□□ 1.97
RNF220-216ENST00000488865 RALAP11233 206 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 GABRG2P18507 467 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 PTGER3P43115 390 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 NOVA1P51513 510 aaKnown RBP27.34■■□□□ 1.97
RNF220-216ENST00000488865 LMAN2Q12907 356 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 ST3GAL2Q16842 350 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 EGFLAMQ63HQ2 1017 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 SDE2Q6IQ49 451 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 SCD5Q86SK9 330 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 MIB1Q86YT6 1006 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 CCDC34Q96HJ3 373 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 FAM124BQ9H5Z6 455 aaPredicted RBP27.34■■□□□ 1.97
RNF220-216ENST00000488865 NUDT5Q9UKK9 219 aa27.34■■□□□ 1.97
RNF220-216ENST00000488865 MAP1BP46821 2468 aaKnown RBP27.33■■□□□ 1.97
RNF220-216ENST00000488865 A0A1W2PQF6 199 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 MDM4O15151 490 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 ZBTB24O43167 697 aaPredicted RBP27.33■■□□□ 1.97
RNF220-216ENST00000488865 TRIM61Q5EBN2 209 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 LYSMD4Q5XG99 296 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 SLC36A4Q6YBV0 504 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 FBXL13Q8NEE6 735 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 SEMA4DQ92854 862 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 HEXIM2Q96MH2 286 aaKnown RBP27.33■■□□□ 1.97
RNF220-216ENST00000488865 NUSAP1Q9BXS6 441 aaKnown RBP27.33■■□□□ 1.97
RNF220-216ENST00000488865 UBXN6Q9BZV1 441 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 ZNF510Q9Y2H8 683 aa27.33■■□□□ 1.97
RNF220-216ENST00000488865 PRRT4C9JH25 899 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 STX10O60499 249 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 STC2O76061 302 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 HOXD12P35452 270 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 MXI1P50539 228 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 ZNF394Q53GI3 561 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 PEAR1Q5VY43 1037 aaPredicted RBP27.32■■□□□ 1.96
RNF220-216ENST00000488865 ARMCX6Q7L4S7 300 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 CHPFQ8IZ52 775 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 TMEM74BQ9NUR3 256 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 RAB20Q9NX57 234 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 CALCOCO1Q9P1Z2 691 aa27.32■■□□□ 1.96
RNF220-216ENST00000488865 CETN3O15182 167 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 AP5Z1O43299 807 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 KRT37O76014 449 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 CISD3P0C7P0 127 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 EPB41P11171 864 aaKnown RBP27.31■■□□□ 1.96
RNF220-216ENST00000488865 CSRP1P21291 193 aaKnown RBP27.31■■□□□ 1.96
RNF220-216ENST00000488865 WASP42768 502 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 DGKGP49619 791 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 COG7P83436 770 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 SLC23A3Q6PIS1 610 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 TOGARAM2Q6ZUX3 1019 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 TMEM176AQ96HP8 235 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 ACOX2Q99424 681 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 GABRG3Q99928 467 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 CD248Q9HCU0 757 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 CISHQ9NSE2 258 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 FBXO10Q9UK96 956 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 PILRBQ9UKJ0 227 aa27.31■■□□□ 1.96
RNF220-216ENST00000488865 GFRA2O00451 464 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 ZNF217O75362 1048 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 CEACAM1P13688 526 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 SH3PXD2AQ5TCZ1 1133 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 ARHGAP18Q8N392 663 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 SLC4A11Q8NBS3 891 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 IPO4Q8TEX9 1081 aaKnown RBP27.3■■□□□ 1.96
RNF220-216ENST00000488865 DCLK3Q9C098 648 aa27.3■■□□□ 1.96
RNF220-216ENST00000488865 KLKB1P03952 638 aa27.29■■□□□ 1.96
RNF220-216ENST00000488865 CHKAP35790 457 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms