RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 MSANTD3Q96H12 275 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 LRFN3Q9BTN0 628 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 NUP58Q9BVL2 599 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 MIS12Q9H081 205 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 EBF3Q9H4W6 596 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 TBC1D17Q9HA65 648 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 DUS2Q9NX74 493 aaKnown RBP19.52■□□□□ 0.72
PTCD3-217ENST00000488801 STC2O76061 302 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 IGLV3-27P01718 113 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 GYPCP04921 128 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 GLI1P08151 1106 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 UNGP13051 313 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-217ENST00000488801 CTHP32929 405 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 SCNN1AP37088 669 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 CENPCQ03188 943 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 EFEMP1Q12805 493 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 RUNX3Q13761 415 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 GAB4Q2WGN9 574 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 ITPRIPL2Q3MIP1 535 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 CC2D1AQ6P1N0 951 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-217ENST00000488801 TPRG1Q6ZUI0 275 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 SLC26A9Q7LBE3 791 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 FBXL6Q8N531 539 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 EDEM1Q92611 657 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 ATP2A3Q93084 1043 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 OTUB2Q96DC9 234 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 SLC2A13Q96QE2 648 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 PCDHB18PQ96TA0 734 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 NACA2Q9H009 215 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 MARCH2Q9P0N8 246 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 RASAL2Q9UJF2 1139 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 PIAS3Q9Y6X2 628 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 NYNRINQ9P2P1 1898 aaKnown RBP19.51■□□□□ 0.71
PTCD3-217ENST00000488801 CHD5Q8TDI0 1954 aa19.51■□□□□ 0.71
PTCD3-217ENST00000488801 SLC9A3R1O14745 358 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 AP5Z1O43299 807 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 IGLV3-25P01717 112 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 IFNAR2P48551 515 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 GSCP56915 257 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 NNTQ13423 1086 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 EIF4EBP2Q13542 120 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 TRIP4Q15650 581 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 ZDHHC17Q8IUH5 632 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 CSGALNACT1Q8TDX6 532 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 IPO4Q8TEX9 1081 aaKnown RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 PBXIP1Q96AQ6 731 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 LINC00597Q9H2U6 94 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 C8orf33Q9H7E9 229 aaPredicted RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 ECT2Q9H8V3 914 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 TBC1D14Q9P2M4 693 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 CAPN11Q9UMQ6 739 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 HBS1LQ9Y450 684 aaKnown RBP19.5■□□□□ 0.71
PTCD3-217ENST00000488801 EML5Q05BV3 1969 aa19.5■□□□□ 0.71
PTCD3-217ENST00000488801 CBFA2T2O43439 604 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 KLKB1P03952 638 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 CYP17A1P05093 508 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 TPM3P06753 285 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 CCDC172P0C7W6 258 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 AOC1P19801 751 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 MMP8P22894 467 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 SOX9P48436 509 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 COG7P83436 770 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 ARID5AQ03989 594 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 PTP4A2Q12974 167 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 TAF5Q15542 800 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 NAA35Q5VZE5 725 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 C1orf228Q6PIY5 440 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 TXNDC11Q6PKC3 985 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 RSRC2Q7L4I2 434 aaKnown RBP19.49■□□□□ 0.71
PTCD3-217ENST00000488801 RALGPS2Q86X27 583 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-217ENST00000488801 XYLT1Q86Y38 959 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 MIB1Q86YT6 1006 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 BBS7Q8IWZ6 715 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 FAM217AQ8IXS0 508 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 PJA1Q8NG27 643 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 DQX1Q8TE96 717 aaKnown RBP19.49■□□□□ 0.71
PTCD3-217ENST00000488801 SYN2Q92777 582 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-217ENST00000488801 PLD4Q96BZ4 506 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 SHDQ96IW2 340 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 AGPAT1Q99943 283 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 TRIM62Q9BVG3 475 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 OSBPL6Q9BZF3 934 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 POPDC2Q9HBU9 364 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 LTB4R2Q9NPC1 389 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 SH3BP1Q9Y3L3 701 aa19.49■□□□□ 0.71
PTCD3-217ENST00000488801 MUC22E2RYF6 1773 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-217ENST00000488801 KANSL1LA0AUZ9 987 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SPECC1L-ADORA2AF8WAN1 911 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SCAMP3O14828 347 aaKnown RBP19.48■□□□□ 0.71
PTCD3-217ENST00000488801 HSF2BPO75031 334 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 DAB1O75553 588 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 NFATC1O95644 943 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 IRF1P10914 325 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 CLCN5P51795 746 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SNX16P57768 344 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 YWHAZP63104 245 aaKnown RBP19.48■□□□□ 0.71
PTCD3-217ENST00000488801 SLC6A3Q01959 620 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 GOLGA8FQ08AF8 430 aa19.48■□□□□ 0.71
PTCD3-217ENST00000488801 GOLGA8DPQ0D2H9 430 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms