RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SLC26A2P50443 739 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 HDAC4P56524 1084 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 INCA1Q0VD86 236 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 SOWAHAQ2M3V2 549 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 DTX3LQ8TDB6 740 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
CLIC4-202ENST00000488683 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
CLIC4-202ENST00000488683 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 NDC80O14777 642 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ADCY6O43306 1168 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 TSPAN1O60635 241 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 MYL2P10916 166 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 SH2D5Q6ZV89 423 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 DCPSQ96C86 337 aaKnown RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ATXN7L3BQ96GX2 97 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 SRPK1Q96SB4 655 aaKnown RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 CYTH2Q99418 400 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 LGMNQ99538 433 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 LRMDAQ9H2I8 198 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 CYP3A43Q9HB55 503 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 PEX11AO75192 247 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 AMPD1P23109 780 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ATICP31939 592 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 GJA5P36382 358 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 MRPS5P82675 430 aaKnown RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ACAP1Q15027 740 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ANKRD20A2Q5SQ80 823 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ANKRD20A1Q5TYW2 823 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ANKRD20A3Q5VUR7 823 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 CLPTM1LQ96KA5 538 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
CLIC4-202ENST00000488683 ASB7Q9H672 318 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
CLIC4-202ENST00000488683 CCDC78A2IDD5 438 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 PAX7P23759 505 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 ETV4P43268 484 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 HSF5Q4G112 596 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 ERO1BQ86YB8 467 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 NUDCD1Q96RS6 583 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 MPHOSPH6Q99547 160 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 POPDC2Q9HBU9 364 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 HMX2A2RU54 273 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 CLDN5O00501 218 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 APOL1O14791 398 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 GOT1P17174 413 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 ACAT1P24752 427 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 CYP2F1P24903 491 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 STIP1P31948 543 aaKnown RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 RCN2Q14257 317 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 CASC4Q6P4E1 433 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 APBB1IPQ7Z5R6 666 aaPredicted RBP13.15□□□□□ -0.3
CLIC4-202ENST00000488683 OSMRQ99650 979 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
CLIC4-202ENST00000488683 SBF1O95248 1867 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 USP12O75317 370 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 DCTN3O75935 186 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 PDHA1P08559 390 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 ALDH3A1P30838 453 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 IREB2P48200 963 aaKnown RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 NEK3P51956 506 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 ARFIP2P53365 341 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 SESN2P58004 480 aaPredicted RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF534Q76KX8 674 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 WDR60Q8WVS4 1066 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.14□□□□□ -0.31
CLIC4-202ENST00000488683 C2CD2LO14523 706 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 COPEO14579 308 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 SPTLC1O15269 473 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 TM9SF1O15321 606 aa13.14□□□□□ -0.31
CLIC4-202ENST00000488683 DHRS4L1P0CG22 281 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms