RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF677Q86XU0 584 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 ADGRG2Q8IZP9 1017 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 TMEM35BQ8NCS4 154 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 EDEM1Q92611 657 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 PPP1R13BQ96KQ4 1090 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 SYNCQ9H7C4 482 aa15.77■□□□□ 0.12
CXCL12-207ENST00000488591 MTF2Q9Y483 593 aaPredicted RBP15.77■□□□□ 0.12
CXCL12-207ENST00000488591 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 SLC12A8A0AV02 714 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 E5RJQ4 531 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 TEX33O43247 280 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 DCNP07585 359 aaKnown RBP15.76■□□□□ 0.11
CXCL12-207ENST00000488591 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 TARSP26639 723 aaKnown RBP15.76■□□□□ 0.11
CXCL12-207ENST00000488591 JAM2P57087 298 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 FANCCQ00597 558 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 FMNL3Q8IVF7 1028 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 WDTC1Q8N5D0 677 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 MSANTD4Q8NCY6 345 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
CXCL12-207ENST00000488591 FAM149B1Q96BN6 582 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 DCLK3Q9C098 648 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 CYTH4Q9UIA0 394 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 ZNF510Q9Y2H8 683 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
CXCL12-207ENST00000488591 A0A1W2PQC6 194 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 OTOL1A6NHN0 477 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 SCAMP3O14828 347 aaKnown RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 LSM8O95777 96 aaKnown RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 ADH1CP00326 375 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 HMBSP08397 361 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 GJA4P35212 333 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 UBASH3AP57075 661 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 GRSF1Q12849 480 aaKnown RBP eCLIP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 LRRC32Q14392 662 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 PON2Q15165 354 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 DGKKQ5KSL6 1271 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 TAF3Q5VWG9 929 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 BBS7Q8IWZ6 715 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 CCDC105Q8IYK2 499 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 C1orf131Q8NDD1 294 aaKnown RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 CLEC4CQ8WTT0 213 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 NAP1L5Q96NT1 182 aaPredicted RBP15.75■□□□□ 0.11
CXCL12-207ENST00000488591 LMAN1LQ9HAT1 526 aa15.75■□□□□ 0.11
CXCL12-207ENST00000488591 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 KMT2EQ8IZD2 1858 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 SHISA7A6NL88 538 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 CAPN9O14815 690 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 PAPSS1O43252 624 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-207ENST00000488591 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
CXCL12-207ENST00000488591 STC2O76061 302 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 NCAM1P13591 858 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 RPS9P46781 194 aaKnown RBP15.74■□□□□ 0.11
CXCL12-207ENST00000488591 GAD2Q05329 585 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 NR1I3Q14994 352 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 DHCR24Q15392 516 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 TXNDC11Q6PKC3 985 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 DTWD2Q8NBA8 298 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 EPS8L1Q8TE68 723 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 CLDN23Q96B33 292 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 PLD4Q96BZ4 506 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 CPXM1Q96SM3 734 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 P2RY13Q9BPV8 354 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 SFMBT1Q9UHJ3 866 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 MYO6Q9UM54 1294 aa15.74■□□□□ 0.11
CXCL12-207ENST00000488591 HBS1LQ9Y450 684 aaKnown RBP15.74■□□□□ 0.11
CXCL12-207ENST00000488591 COL4A3Q01955 1670 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 TRDMT1O14717 391 aaKnown RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 CYP17A1P05093 508 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 TPM3P06753 285 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 GLI1P08151 1106 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 MMEP08473 750 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 ADH5P11766 374 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 CDH5P33151 784 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 YWHAZP63104 245 aaKnown RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 CDR2Q01850 454 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 ARID5AQ03989 594 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 EFHC1Q5JVL4 640 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 OR6B2Q6IFH4 312 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 MSANTD2Q6P1R3 559 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 RHBDF2Q6PJF5 856 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 BEND5Q7L4P6 421 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 DDX1Q92499 740 aaKnown RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 WBP2Q969T9 261 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 IER2Q9BTL4 223 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 NUP58Q9BVL2 599 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 IRF2BPLQ9H1B7 796 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 POPDC2Q9HBU9 364 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 SPHK2Q9NRA0 654 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 DLGAP2Q9P1A6 1054 aa15.73■□□□□ 0.11
CXCL12-207ENST00000488591 NOCTQ9UK39 431 aaKnown RBP15.73■□□□□ 0.11
CXCL12-207ENST00000488591 F5P12259 2224 aa15.72■□□□□ 0.11
CXCL12-207ENST00000488591 GREM1O60565 184 aa15.72■□□□□ 0.11
CXCL12-207ENST00000488591 CHRNB1P11230 501 aa15.72■□□□□ 0.11
CXCL12-207ENST00000488591 FERP16591 822 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms