RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.27□□□□□ -0.28
NELFE-209ENST00000488426 RASAL2Q9UJF2 1139 aa13.27□□□□□ -0.28
NELFE-209ENST00000488426 VWA8A3KMH1 1905 aa13.27□□□□□ -0.28
NELFE-209ENST00000488426 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 HHLA1C9JL84 531 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 PI4K2BG5E9Z4 385 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 TTI1O43156 1089 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 PRPSAP2O60256 369 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 LAG3P18627 525 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 COILP38432 576 aaPredicted RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 MATKP42679 507 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 CDKN2BP42772 138 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 CUL1Q13616 776 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 PLPP4Q5VZY2 271 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 CCDC137Q6PK04 289 aaKnown RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 STRADAQ7RTN6 431 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 LRRTM3Q86VH5 581 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 SPATA2LQ8IUW3 424 aaPredicted RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 SLC39A11Q8N1S5 342 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 SCML4Q8N228 414 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 FAM172AQ8WUF8 416 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 SEC14L1Q92503 715 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 SLCO2A1Q92959 643 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 ZCWPW1Q9H0M4 648 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 TLR9Q9NR96 1032 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 AAASQ9NRG9 546 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 KLHL11Q9NVR0 708 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 MARCH5Q9NX47 278 aa13.27□□□□□ -0.29
NELFE-209ENST00000488426 UTP11Q9Y3A2 253 aaKnown RBP13.27□□□□□ -0.29
NELFE-209ENST00000488426 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 GALTP07902 379 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 FGFR3P22607 806 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 BDNFP23560 247 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 KDELR1P24390 212 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 DAOAP59103 153 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 ATP11AP98196 1134 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 CCNG2Q16589 344 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 CDO1Q16878 200 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 BOLA3Q53S33 107 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 CYP4V2Q6ZWL3 525 aaPredicted RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 IRGQQ8WZA9 623 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
NELFE-209ENST00000488426 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 SLC2A13Q96QE2 648 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 PEBP4Q96S96 227 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 KCNK16Q96T55 309 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 VN1R3Q9BXE9 311 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 HEMGNQ9BXL5 484 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 OXCT2Q9BYC2 517 aaPredicted RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 TMEM30AQ9NV96 361 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
NELFE-209ENST00000488426 FEZ2Q9UHY8 353 aaPredicted RBP13.26□□□□□ -0.29
NELFE-209ENST00000488426 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 MDM4O15151 490 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 NOS2P35228 1153 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 PTGIRP43119 386 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 HDAC4P56524 1084 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 SMTNL2Q2TAL5 461 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 SLC25A52Q3SY17 297 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 SH3PXD2AQ5TCZ1 1133 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ZNF280DQ6N043 979 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 FUT10Q6P4F1 479 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 AENQ8WTP8 325 aaKnown RBP13.25□□□□□ -0.29
NELFE-209ENST00000488426 GRK7Q8WTQ7 553 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 CASKIN2Q8WXE0 1202 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 MSLNLQ96KJ4 702 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ULBP1Q9BZM6 244 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 TLE6Q9H808 572 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 POPDC2Q9HBU9 364 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 STAP1Q9ULZ2 295 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
NELFE-209ENST00000488426 ENDOD1O94919 500 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ZBED1O96006 694 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 MYBL2P10244 700 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 NDUFV1P49821 464 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 DRG2P55039 364 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms