RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TPGS1Q6ZTW0 290 aa23.77■■□□□ 1.4
PTPN4-211ENST00000488279 TERB1Q8NA31 727 aa23.77■■□□□ 1.4
PTPN4-211ENST00000488279 SMOC1Q9H4F8 434 aa23.77■■□□□ 1.4
PTPN4-211ENST00000488279 ZDHHC4Q9NPG8 344 aa23.77■■□□□ 1.4
PTPN4-211ENST00000488279 DNAJC17Q9NVM6 304 aaKnown RBP23.77■■□□□ 1.4
PTPN4-211ENST00000488279 BCCIPQ9P287 314 aaKnown RBP eCLIP23.77■■□□□ 1.4
PTPN4-211ENST00000488279 NCOR2Q9Y618 2525 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 RALGAPA1Q6GYQ0 2036 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 BCLAF3A2AJT9 711 aaKnown RBP23.76■■□□□ 1.39
PTPN4-211ENST00000488279 NEDD8-MDP1E9PL57 170 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 CAVIN2O95810 425 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 TYRP14679 529 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 STIM1Q13586 685 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 C10orf76Q5T2E6 689 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 PMS2CLQ68D20 193 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 MIB1Q86YT6 1006 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 ARHGAP18Q8N392 663 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 ZNF513Q8N8E2 541 aaPredicted RBP23.76■■□□□ 1.39
PTPN4-211ENST00000488279 ANKRD52Q8NB46 1076 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 RXFP3Q9NSD7 469 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 MARK1Q9P0L2 795 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 STARD13Q9Y3M8 1113 aa23.76■■□□□ 1.39
PTPN4-211ENST00000488279 MYH10P35580 1976 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 PSMA7O14818 248 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 TRIM24O15164 1050 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 CACNG3O60359 315 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 YWHAEP62258 255 aaKnown RBP23.75■■□□□ 1.39
PTPN4-211ENST00000488279 COG7P83436 770 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 CUL2Q13617 745 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 PPM1JQ5JR12 505 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 PIGZQ86VD9 579 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 OLIG1Q8TAK6 271 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 DHTKD1Q96HY7 919 aaPredicted RBP23.75■■□□□ 1.39
PTPN4-211ENST00000488279 CIZ1Q9ULV3 898 aaPredicted RBP23.75■■□□□ 1.39
PTPN4-211ENST00000488279 ZNF510Q9Y2H8 683 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 MYOFQ9NZM1 2061 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 MYO16Q9Y6X6 1858 aa23.75■■□□□ 1.39
PTPN4-211ENST00000488279 SPAG17Q6Q759 2223 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 TRIM49BA6NDI0 452 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 STC2O76061 302 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 BYSLQ13895 437 aaKnown RBP23.74■■□□□ 1.39
PTPN4-211ENST00000488279 RAB41Q5JT25 222 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 STPG1Q5TH74 334 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 Q6ZNB5 142 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 ELOA2Q8IYF1 753 aaPredicted RBP23.74■■□□□ 1.39
PTPN4-211ENST00000488279 PGBD3Q8N328 593 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 HMGB4Q8WW32 186 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 SLC35C1Q96A29 364 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 SPACA7Q96KW9 195 aa23.74■■□□□ 1.39
PTPN4-211ENST00000488279 METTL14Q9HCE5 456 aaKnown RBP23.74■■□□□ 1.39
PTPN4-211ENST00000488279 TCRBV21S2A2A0A5A6 115 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 MAP3K13O43283 966 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 BCKDHBP21953 392 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 NTSR1P30989 418 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 P2RY2P41231 377 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 PPP1R2P41236 205 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 EFEMP1Q12805 493 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 ISM2Q6H9L7 571 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 SDE2Q6IQ49 451 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 RLN3Q8WXF3 142 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 RASAL2Q9UJF2 1139 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 KIAA1549LQ6ZVL6 1849 aa23.73■■□□□ 1.39
PTPN4-211ENST00000488279 EML5Q05BV3 1969 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 ZBTB24O43167 697 aaPredicted RBP23.72■■□□□ 1.39
PTPN4-211ENST00000488279 CHKAP35790 457 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 TKTL1P51854 596 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 SGO2Q562F6 1265 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 TCEAL6Q6IPX3 200 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 RSRC2Q7L4I2 434 aaKnown RBP23.72■■□□□ 1.39
PTPN4-211ENST00000488279 BHMTQ93088 406 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 TCEAL3Q969E4 200 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 DCLK3Q9C098 648 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 HESX1Q9UBX0 185 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 HCN2Q9UL51 889 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 KIAA1257Q9ULG3 409 aa23.72■■□□□ 1.39
PTPN4-211ENST00000488279 SPTBN2O15020 2390 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 ZBED1O96006 694 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 KLKB1P03952 638 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 HOXB2P14652 356 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 CD19P15391 556 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 TBXAS1P24557 533 aaPredicted RBP23.71■■□□□ 1.39
PTPN4-211ENST00000488279 DHPSP49366 369 aaPredicted RBP23.71■■□□□ 1.39
PTPN4-211ENST00000488279 DGKGP49619 791 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 BCAT1P54687 386 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 YWHAGP61981 247 aaKnown RBP eCLIP23.71■■□□□ 1.39
PTPN4-211ENST00000488279 LRMPQ12912 555 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 GOLGA7BQ2TAP0 167 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 RNF43Q68DV7 783 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 PM20D1Q6GTS8 502 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 LPCAT2Q7L5N7 544 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 CYP2U1Q7Z449 544 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 CHPFQ8IZ52 775 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 CEP63Q96MT8 703 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 MARCH2Q9P0N8 246 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 MAN1B1Q9UKM7 699 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 TSPAN16Q9UKR8 245 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 STRIP2Q9ULQ0 834 aa23.71■■□□□ 1.39
PTPN4-211ENST00000488279 PRRT4C9JH25 899 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 TM4SF5O14894 197 aa23.7■■□□□ 1.38
PTPN4-211ENST00000488279 XPO1O14980 1071 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms