RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 INO80DQ53TQ3 878 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 MTX3Q5HYI7 312 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 ANO1Q5XXA6 986 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 MRNIPQ6NTE8 343 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 CLEC9AQ6UXN8 241 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 CACNA2D3Q8IZS8 1091 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 SMCR8Q8TEV9 937 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 XAGE5Q8WWM1 108 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 DPF1Q92782 380 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 PBKQ96KB5 322 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 HIST1H2AAQ96QV6 131 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 PRR25Q96S07 402 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 RMDN3Q96TC7 470 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 VN1R3Q9BXE9 311 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 EPS8L2Q9H6S3 715 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 ZBTB26Q9HCK0 441 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 TM7SF3Q9NS93 570 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 EHD3Q9NZN3 535 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 LRFN1Q9P244 771 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 SLC27A6Q9Y2P4 619 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 DTNAQ9Y4J8 743 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 PCDHGB3Q9Y5G1 929 aa3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 MORC2Q9Y6X9 1032 aaPredicted RBP3.38□□□□□ -1.87
R3HDM1-219ENST00000488035 PLEKHD1A6NEE1 506 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 OR2W5A6NFC9 320 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SYT5O00445 386 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 MPPED1O15442 326 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SPRY2O43597 315 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 TLR5O60602 858 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 COQ9O75208 318 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SKAP2O75563 359 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 CSTBP04080 98 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 GYS1P13807 737 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ZFXP17010 805 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 KLRK1P26718 216 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 RBL1P28749 1068 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 EPHA3P29320 983 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 PRKAR1BP31321 381 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SLC5A2P31639 672 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 MCM5P33992 734 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 TUBA4AP68366 448 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SSBP2P81877 361 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 GRM1Q13255 1194 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 FHL1Q13642 323 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 BLMHQ13867 455 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ZNF618Q5T7W0 954 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 KAZNQ674X7 775 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 GRHL2Q6ISB3 625 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 PGBD2Q6P3X8 592 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 USP17L6PQ6QN14 398 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ZNF517Q6ZMY9 492 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SUGP1Q8IWZ8 645 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SMC5Q8IY18 1101 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 NKAPQ8N5F7 415 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 MBD3L2Q8NHZ7 208 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 FAM71BQ8TC56 605 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 CTHRC1Q96CG8 243 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ZDHHC12Q96GR4 267 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 WDR24Q96S15 920 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 SORBS1Q9BX66 1292 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 EIF2AQ9BY44 585 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 MAGEH1Q9H213 219 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ASAP1Q9ULH1 1129 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 ST3GAL5Q9UNP4 418 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 COL15A1P39059 1388 aa3.37□□□□□ -1.87
R3HDM1-219ENST00000488035 H0YIZ8 118 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 J3KTA2 159 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 AP4M1O00189 453 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 EIF3JO75822 258 aaKnown RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 URI1O94763 535 aaPredicted RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 SRGAP2BP0DMP2 458 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 NPPBP16860 134 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 ENGP17813 658 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 FPR3P25089 353 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 SERPINF1P36955 418 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 PBX1P40424 430 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 PNLIPRP1P54315 467 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 PSG6Q00889 435 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 E2F1Q01094 437 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 DEUP1Q05D60 604 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 NSUN2Q08J23 767 aaKnown RBP eCLIP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 SLC10A2Q12908 348 aaPredicted RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 MTAPQ13126 283 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 ATP1A4Q13733 1029 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 PTK2BQ14289 1009 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 GRM4Q14833 912 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 GORABQ5T7V8 394 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 FCRLBQ6BAA4 426 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 SULT6B1Q6IMI4 303 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 JMJD6Q6NYC1 403 aaPredicted RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 MZT2AQ6P582 158 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 TLDC1Q6P9B6 456 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 CERS3Q8IU89 383 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 SUN3Q8TAQ9 357 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 STT3BQ8TCJ2 826 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 MCRS1Q96EZ8 462 aa3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 PRR11Q96HE9 360 aaPredicted RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 ZNF668Q96K58 619 aaPredicted RBP3.36□□□□□ -1.87
R3HDM1-219ENST00000488035 LENG8Q96PV6 779 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms