RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LCA5LO95447 670 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 TBX18O95935 607 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 KRT3P12035 628 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 NOS2P35228 1153 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 MATKP42679 507 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 KPNA1P52294 538 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 COG7P83436 770 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 TJAP1Q5JTD0 557 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 EDEM1Q92611 657 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 PIWIL1Q96J94 861 aaKnown RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 KLF16Q9BXK1 252 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-207ENST00000487645 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 MARCH2Q9P0N8 246 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 LIMD1Q9UGP4 676 aa13.92□□□□□ -0.18
COL4A6-207ENST00000487645 ANKRD62A6NC57 917 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 DPYSL4O14531 572 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 SP100P23497 879 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 RRM1P23921 792 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 FCARP24071 287 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 RNASE9P60153 205 aaKnown RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 GPC5P78333 572 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 HTR4Q13639 388 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 DCAF6Q58WW2 860 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 TANGO2Q6ICL3 276 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 PLEKHA7Q6IQ23 1121 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 PARM1Q6UWI2 310 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 TMEM139Q8IV31 216 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 MFSD6LQ8IWD5 586 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 DEFB106AQ8N104 65 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 PDLIM2Q96JY6 352 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 DDX23Q9BUQ8 820 aaKnown RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 SELENOOQ9BVL4 669 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 NUDT5Q9UKK9 219 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 INTUQ9ULD6 942 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 NAALADL1Q9UQQ1 740 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 HBS1LQ9Y450 684 aaKnown RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 CPQQ9Y646 472 aa13.91□□□□□ -0.18
COL4A6-207ENST00000487645 EPN1Q9Y6I3 576 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-207ENST00000487645 FAM170AA1A519 330 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 HEPACAM2A8MVW5 462 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
COL4A6-207ENST00000487645 DAB1O75553 588 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 GRAP2O75791 330 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 PRAMEF12O95522 483 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 GBP1P32455 592 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 VIPR2P41587 438 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 GALCP54803 685 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 ZXDBP98169 803 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 EFEMP1Q12805 493 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 NNTQ13423 1086 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 MAMLD1Q13495 774 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 PPP1R15BQ5SWA1 713 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 DNAJC24Q6P3W2 148 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 FGF14Q92915 247 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
COL4A6-207ENST00000487645 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
COL4A6-207ENST00000487645 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 KCNK12Q9HB15 430 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 CNOT8Q9UFF9 292 aaKnown RBP13.9□□□□□ -0.18
COL4A6-207ENST00000487645 SFMBT1Q9UHJ3 866 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 SCINQ9Y6U3 715 aa13.9□□□□□ -0.18
COL4A6-207ENST00000487645 KIF26AQ9ULI4 1882 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-207ENST00000487645 A0A0C4DFX4 3053 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 LEFTY2O00292 366 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 ZNF263O14978 683 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 NDUFA10O95299 355 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 F9P00740 461 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 IGLV3-25P01717 112 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 CYP1A2P05177 515 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 EIF4EBP2Q13542 120 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SPA17Q15506 151 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SLC25A52Q3SY17 297 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 VITQ6UXI7 678 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 PHLDB2Q86SQ0 1253 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 MIB1Q86YT6 1006 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SLC44A3Q8N4M1 653 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 DQX1Q8TE96 717 aaKnown RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SH3RF2Q8TEC5 729 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms