RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 EVA1CP58658 441 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 GPC5P78333 572 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 TXNL4AP83876 142 aaKnown RBP3.48□□□□□ -1.85
SENP6-210ENST00000487548 SLC13A2Q13183 592 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 STK3Q13188 491 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 KEAP1Q14145 624 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 IZUMO4Q1ZYL8 232 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 NADSYN1Q6IA69 706 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 NPNTQ6UXI9 565 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 TFAP2DQ7Z6R9 452 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 COL23A1Q86Y22 540 aaPredicted RBP3.48□□□□□ -1.85
SENP6-210ENST00000487548 METTL25Q8N6Q8 603 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 FAM71DQ8N9W8 422 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 OR6B3Q8NGW1 331 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 NT5C1BQ96P26 610 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 AAMDCQ9H7C9 122 aa3.48□□□□□ -1.85
SENP6-210ENST00000487548 GAR1Q9NY12 217 aaKnown RBP3.48□□□□□ -1.85
SENP6-210ENST00000487548 HEMK1Q9Y5R4 338 aaPredicted RBP3.48□□□□□ -1.85
SENP6-210ENST00000487548 NOTCH3Q9UM47 2321 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 AGPSO00116 658 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 CD3EAPO15446 510 aaKnown RBP3.47□□□□□ -1.85
SENP6-210ENST00000487548 TBC1D4O60343 1298 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 NPR1P16066 1061 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 CDK11BP21127 795 aaKnown RBP3.47□□□□□ -1.85
SENP6-210ENST00000487548 NTSR1P30989 418 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 HOXA7P31268 230 aaPredicted RBP3.47□□□□□ -1.85
SENP6-210ENST00000487548 GATMP50440 423 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 PGDP52209 483 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 RAB1AP62820 205 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 FGL2Q14314 439 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 PRAMEF19Q5SWL8 479 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 PDXDC1Q6P996 788 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 SLC39A5Q6ZMH5 540 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 TRAPPC11Q7Z392 1133 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 LMO3Q8TAP4 145 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 JPH3Q8WXH2 748 aaPredicted RBP3.47□□□□□ -1.85
SENP6-210ENST00000487548 KAZALD1Q96I82 304 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 MAP3K14Q99558 947 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.47□□□□□ -1.85
SENP6-210ENST00000487548 PRKAB1Q9Y478 270 aa3.47□□□□□ -1.85
SENP6-210ENST00000487548 NTN3O00634 580 aaPredicted RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 TLX3O43711 291 aaPredicted RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 AP1G1O43747 822 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 GALNSP34059 522 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 PTDSS1P48651 473 aaKnown RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 COMPP49747 757 aaPredicted RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 JAK3P52333 1124 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 SLC12A2P55011 1212 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 RAB32Q13637 225 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 TRILQ7L0X0 811 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 P3H2Q8IVL5 708 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 PNPLA1Q8N8W4 532 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 HSPBAP1Q96EW2 488 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 TRIM5Q9C035 493 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 MOV10Q9HCE1 1003 aaKnown RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 AGO4Q9HCK5 861 aaKnown RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 NKX1-2Q9UD57 310 aaPredicted RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 RIMKLBQ9ULI2 386 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 FZD4Q9ULV1 537 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 VPS4AQ9UN37 437 aa3.46□□□□□ -1.86
SENP6-210ENST00000487548 LUC7L2Q9Y383 392 aaKnown RBP3.46□□□□□ -1.86
SENP6-210ENST00000487548 TRBV5-3A0A0A0MS03 114 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 A0A1W2PPL8 197 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 C16orf96A6NNT2 1141 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 SOCS5O75159 536 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 RASSF9O75901 435 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 PIAS2O75928 621 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 RPS6KB1P23443 525 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 TBXAS1P24557 533 aaPredicted RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 ADRA1DP25100 572 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 VPS41P49754 854 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 WDR5P61964 334 aaKnown RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 TIAL1Q01085 375 aaKnown RBP eCLIP3.45□□□□□ -1.863e-6■■■■□ 20.6
SENP6-210ENST00000487548 KIF26BQ2KJY2 2108 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 INO80DQ53TQ3 878 aaPredicted RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 CLEC9AQ6UXN8 241 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 RBM44Q6ZP01 1051 aaKnown RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 OR56A3Q8NH54 315 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 MSI2Q96DH6 328 aaKnown RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 PRR11Q96HE9 360 aaPredicted RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 VPS50Q96JG6 964 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 PPP1R9BQ96SB3 815 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 PAPOLBQ9NRJ5 636 aaKnown RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 THSD1Q9NS62 852 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 DNMT3BQ9UBC3 853 aaKnown RBP3.45□□□□□ -1.86
SENP6-210ENST00000487548 MYO6Q9UM54 1294 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 PCDHGB1Q9Y5G3 927 aa3.45□□□□□ -1.86
SENP6-210ENST00000487548 RRP9O43818 475 aaKnown RBP3.44□□□□□ -1.86
SENP6-210ENST00000487548 PARP1P09874 1014 aaKnown RBP3.44□□□□□ -1.86
SENP6-210ENST00000487548 CHRNB1P11230 501 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 KCNJ4P48050 445 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 DSCR9P59020 149 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 GAD2Q05329 585 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 CCDC15Q0P6D6 951 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 ZNF267Q14586 743 aaPredicted RBP3.44□□□□□ -1.86
SENP6-210ENST00000487548 INSCQ1MX18 579 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 SMTNL2Q2TAL5 461 aa3.44□□□□□ -1.86
SENP6-210ENST00000487548 KRT71Q3SY84 523 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms