RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 HAUS6Q7Z4H7 955 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 POLNQ7Z5Q5 900 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF677Q86XU0 584 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 CYP2W1Q8TAV3 490 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SEMA4DQ92854 862 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ATP6V0A1Q93050 837 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 CCDC138Q96M89 665 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF577Q9BSK1 485 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 KLHL25Q9H0H3 589 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 TRPC7Q9HCX4 862 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ATAD3AQ9NVI7 634 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ADA2Q9NZK5 511 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SAE1Q9UBE0 346 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 RBMX2Q9Y388 322 aaKnown RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 AP4S1Q9Y587 144 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 CEPT1Q9Y6K0 416 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SQORQ9Y6N5 450 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 NEMP1O14524 444 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SPTLC1O15269 473 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 GMNNO75496 209 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 IL1BP01584 269 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 BPGMP07738 259 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 TSHRP16473 764 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF23P17027 643 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 FGFR3P22607 806 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 S100A1P23297 94 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 PSMA2P25787 234 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 MAP4P27816 1152 aaKnown RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 EEF1DP29692 281 aaKnown RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 MSX2P35548 267 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SPIRE1Q08AE8 756 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 DMPKQ09013 629 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 GK3PQ14409 553 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 NR1D2Q14995 579 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 EGFLAMQ63HQ2 1017 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 BORAQ6PGQ7 559 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 TTC33Q6PID6 262 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 ALDH16A1Q8IZ83 802 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 TMA16Q96EY4 203 aaKnown RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 PPP1R36Q96LQ0 422 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 BIRC8Q96P09 236 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 GPR101Q96P66 508 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-209ENST00000487188 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 CDRT15Q96T59 188 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 EFHD1Q9BUP0 239 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 WDR11Q9BZH6 1224 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 IMPG2Q9BZV3 1241 aa6.45□□□□□ -1.38
VPS13D-209ENST00000487188 FUOMA2VDF0 154 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SDR42E2A6NKP2 422 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SLITRK3O94933 977 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 ADRB2P07550 413 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 OSBPP22059 807 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 KCNA4P22459 653 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 ACAT1P24752 427 aaKnown RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 POLD1P28340 1107 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 IGBP1P78318 339 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 ROR1Q01973 937 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 MFSD14BQ5SR56 506 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 C6orf183Q5T699 404 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 LMBRD2Q68DH5 695 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 PPP1R2P3Q6NXS1 205 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 CDHR3Q6ZTQ4 885 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SEMA6AQ9H2E6 1030 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 PNPLA3Q9NST1 481 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 KCND2Q9NZV8 630 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SERPINB13Q9UIV8 391 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SNCAIPQ9Y6H5 919 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 hCG_1818297A0A087WSY0 165 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 A0A087WXM4 84 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 CFAP99D6REC4 459 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 PSMD12O00232 456 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 GNPATO15228 680 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 TMEM63AO94886 807 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 S100BP04271 92 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 PIM1P11309 404 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 CPOXP36551 454 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SREBF1P36956 1147 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 RXRGP48443 463 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 MAMLD1Q13495 774 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 CCDC153Q494R4 210 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 DRICH1Q6PGQ1 229 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 ARCQ7LC44 396 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SNX32Q86XE0 403 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 CENPSQ8N2Z9 138 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 KCTD17Q8N5Z5 321 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 KCTD6Q8NC69 237 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 NKD2Q969F2 451 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SLC35B4Q969S0 331 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 TMIGD2Q96BF3 282 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 RBM38Q9H0Z9 239 aaKnown RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 STN1Q9H668 368 aaKnown RBP6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SLC9A2Q9UBY0 812 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 DAPK2Q9UIK4 370 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 PADI4Q9UM07 663 aa6.44□□□□□ -1.38
VPS13D-209ENST00000487188 SRCAPQ6ZRS2 3230 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms