RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PBX1P40424 430 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 NSFP46459 744 aaKnown RBP15.31■□□□□ 0.04
LIMS3-205ENST00000487150 HARS2P49590 506 aaKnown RBP15.31■□□□□ 0.04
LIMS3-205ENST00000487150 YWHAZP63104 245 aaKnown RBP15.31■□□□□ 0.04
LIMS3-205ENST00000487150 NOMO3P69849 1222 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 ARID5AQ03989 594 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 SARM1Q6SZW1 724 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 HTR3DQ70Z44 454 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 SLC26A9Q7LBE3 791 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 MIB1Q86YT6 1006 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 BAP1Q92560 729 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 LRRC3BQ96PB8 259 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 PRRX2Q99811 253 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 IER2Q9BTL4 223 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 DDX23Q9BUQ8 820 aaKnown RBP15.31■□□□□ 0.04
LIMS3-205ENST00000487150 TTYH3Q9C0H2 523 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 HEBP1Q9NRV9 189 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 AIPL1Q9NZN9 384 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 WNT6Q9Y6F9 365 aa15.31■□□□□ 0.04
LIMS3-205ENST00000487150 KRBA1A5PL33 1030 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 LRRC53A6NM62 1247 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
LIMS3-205ENST00000487150 TBX18O95935 607 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 IRF1P10914 325 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 CTHP32929 405 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 CHKAP35790 457 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 GABRB2P47870 512 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 ZBED6P86452 979 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 RING1Q06587 406 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 EML3Q32P44 896 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 PTPN20Q4JDL3 420 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 NAA35Q5VZE5 725 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 NUGGCQ68CJ6 796 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 ASTLQ6HA08 431 aaPredicted RBP15.3■□□□□ 0.04
LIMS3-205ENST00000487150 HFE2Q6ZVN8 426 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 UNC45BQ8IWX7 931 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 FLCNQ8NFG4 579 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 DOCK6Q96HP0 2047 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 ZFYVE19Q96K21 471 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 XPO4Q9C0E2 1151 aaKnown RBP15.3■□□□□ 0.04
LIMS3-205ENST00000487150 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
LIMS3-205ENST00000487150 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 CYTH4Q9UIA0 394 aa15.3■□□□□ 0.04
LIMS3-205ENST00000487150 LUC7L2Q9Y383 392 aaKnown RBP15.3■□□□□ 0.04
LIMS3-205ENST00000487150 SLC12A8A0AV02 714 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 FAM86C2PA6NEL3 165 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PIK3R2O00459 728 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 STC2O76061 302 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 CYP1A1P04798 512 aaPredicted RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 CALB1P05937 261 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 DESP17661 470 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 EIF2DP41214 584 aaKnown RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PRKCIP41743 596 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PGFP49763 221 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 CDK17Q00537 523 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 FMO1Q01740 532 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 LRRC32Q14392 662 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 TRIP4Q15650 581 aaPredicted RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 OLFML1Q6UWY5 402 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 WDTC1Q8N5D0 677 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PJA1Q8NG27 643 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 FAM3CQ92520 227 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 EDEM1Q92611 657 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 AGPAT1Q99943 283 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 IRX2Q9BZI1 471 aaPredicted RBP15.29■□□□□ 0.04
LIMS3-205ENST00000487150 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 GTSE1Q9NYZ3 720 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 STAP1Q9ULZ2 295 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 SIT1Q9Y3P8 196 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
LIMS3-205ENST00000487150 DAB1O75553 588 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 GABBR2O75899 941 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 ERBB2P04626 1255 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 SLC2A3P11169 496 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 AOC1P19801 751 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 MMP8P22894 467 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 CORO1AP31146 461 aaKnown RBP15.28■□□□□ 0.04
LIMS3-205ENST00000487150 GBP1P32455 592 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 SLC11A2P49281 568 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 ZXDBP98169 803 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 SLC6A3Q01959 620 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 CENPCQ03188 943 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms