RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
COL3A1-206ENST00000487010 FAM159BA6NKW6 160 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 APRTP07741 180 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 C6orf222P0C671 652 aaPredicted RBP12.65□□□□□ -0.39
COL3A1-206ENST00000487010 GPD1P21695 349 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 RBL1P28749 1068 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 ICAM3P32942 547 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 RAB6CQ53S08 254 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 ILDR2Q71H61 639 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 MCUQ8NE86 351 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 PCYT2Q99447 389 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 CNPY3Q9BT09 278 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 RAB6CQ9H0N0 254 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 NRBP2Q9NSY0 501 aa12.65□□□□□ -0.39
COL3A1-206ENST00000487010 MGAMO43451 1857 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 BCLAF3A2AJT9 711 aaKnown RBP12.64□□□□□ -0.39
COL3A1-206ENST00000487010 MEI4A8MW99 385 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 B4GALT4O60513 344 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 MAFO75444 373 aaPredicted RBP12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ZBED1O96006 694 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 PRKCBP05771 671 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ANK1P16157 1881 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 SERPINB9P50453 376 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 PDE1BQ01064 536 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TUBB3Q13509 450 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 HIC1Q14526 733 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 KRT81Q14533 505 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 MROH9Q5TGP6 573 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TRMT10BQ6PF06 316 aaKnown RBP12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TIFABQ6ZNK6 161 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 RAPH1Q70E73 1250 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 GSTCDQ8NEC7 633 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 GSDMBQ8TAX9 411 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 FAM172AQ8WUF8 416 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 TWNKQ96RR1 684 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ZDHHC7Q9NXF8 308 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 IL1RAPL1Q9NZN1 696 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 ADAMTS5Q9UNA0 930 aa12.64□□□□□ -0.39
COL3A1-206ENST00000487010 PHIPQ8WWQ0 1821 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 C2CD4BA6NLJ0 364 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 PRPSAP2O60256 369 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 KRT19P08727 400 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 TGM2P21980 687 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 IL4RP24394 825 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 GSTT1P30711 240 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 GPD2P43304 727 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 MAGEA3P43357 314 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 CDK7P50613 346 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 BACE1P56817 501 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 PTPN11Q06124 597 aaPredicted RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 STXBP2Q15833 593 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 DBN1Q16643 649 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 C15orf59Q2T9L4 293 aaPredicted RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 PDSS2Q86YH6 399 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 WDR75Q8IWA0 830 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 MAP7D3Q8IWC1 876 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 SHKBP1Q8TBC3 707 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 SIGLEC10Q96LC7 697 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 EBNA1BP2Q99848 306 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 EBF3Q9H4W6 596 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 ACAD9Q9H845 621 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 LCTP09848 1927 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 M0QYV0 167 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 APOL1O14791 398 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 CCNT2O60583 730 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 KLHL2O95198 593 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 TOP3BO95985 862 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 GSRP00390 522 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 HMGCRP04035 888 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 PDGFRAP16234 1089 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 BCAR1P56945 870 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 DYNC1I2Q13409 638 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 PDK2Q15119 407 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
COL3A1-206ENST00000487010 RABGAP1LQ5R372 815 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 STXBP5Q5T5C0 1151 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 ACAD11Q709F0 780 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
COL3A1-206ENST00000487010 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms