RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GNAI2P04899 355 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 CYP2B6P20813 491 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 MASP1P48740 699 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 IRX3P78415 501 aaPredicted RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 TMPRSS15P98073 1019 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 LRIT3Q3SXY7 679 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 MAP3K21Q5TCX8 1036 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 TMPRSS9Q7Z410 1059 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 SLC17A8Q8NDX2 589 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 GPRC5AQ8NFJ5 357 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 DIS3LQ8TF46 1054 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 NRG4Q8WWG1 115 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 TRIB2Q92519 343 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 CYFIP2Q96F07 1278 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 AHCYL2Q96HN2 611 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 MED15Q96RN5 788 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 P2RX7Q99572 595 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 CAAP1Q9H8G2 361 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 GPR108Q9NPR9 543 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 TMOD4Q9NZQ9 345 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 OGDHLQ9ULD0 1010 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 SLC45A2Q9UMX9 530 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 DNM3Q9UQ16 869 aa4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 ZNFX1Q9P2E3 1918 aaKnown RBP4.78□□□□□ -1.64
SNRNP40-205ENST00000486941 PNMA6EA0A0J9YXQ4 647 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 AGFG2O95081 481 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 WT1P19544 449 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 MAPK4P31152 587 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 CTXN1P60606 82 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 MC2RQ01718 297 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 CD300EQ496F6 205 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 CCDC158Q5M9N0 1113 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 NAA16Q6N069 864 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 FAM180AQ6UWF9 173 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 ATF7IPQ6VMQ6 1270 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 SOCS4Q8WXH5 440 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 USP6NLQ92738 828 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 TMEM125Q96AQ2 219 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 SARAFQ96BY9 339 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 KLHL32Q96NJ5 620 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 C11orf49Q9H6J7 331 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 DNAJC18Q9H819 358 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 CPNE5Q9HCH3 593 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 TXNRD2Q9NNW7 524 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 AATFQ9NY61 560 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 DMTF1Q9Y222 760 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 SMCHD1A6NHR9 2005 aa4.77□□□□□ -1.65
SNRNP40-205ENST00000486941 FLT1P17948 1338 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 MAST2Q6P0Q8 1798 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 PRAMEF33A0A0G2JMD5 474 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 WDR27A2RRH5 827 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 MPPED1O15442 326 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 BRINP1O60477 761 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 PRAMEF10O60809 474 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 SUN1O94901 812 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 CELA2AP08217 269 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ALAS1P13196 640 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TRIM27P14373 513 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ZKSCAN1P17029 563 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ITGB6P18564 788 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 AGXTP21549 392 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 RGS2P41220 211 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 CCNA1P78396 465 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TFF2Q03403 129 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 MYO9BQ13459 2157 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TTC39AQ5SRH9 613 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 AKNAD1Q5T1N1 836 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 KAZNQ674X7 775 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TATDN1Q6P1N9 297 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TMED8Q6PL24 325 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 BHLHA9Q7RTU4 235 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 GPR142Q7Z601 462 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ADGRA1Q86SQ6 560 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 CERS3Q8IU89 383 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 CCAR1Q8IX12 1150 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TDHQ8IZJ6 230 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 DEFB123Q8N688 67 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 PPM1NQ8N819 430 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 IFI44Q8TCB0 444 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 C12orf42Q96LP6 360 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 DMRTA2Q96SC8 542 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 C11orf54Q9H0W9 315 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 TUBD1Q9UJT1 453 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 INTUQ9ULD6 942 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ZBTB21Q9ULJ3 1066 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 ZMYND8Q9ULU4 1186 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 NOP58Q9Y2X3 529 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 RABGAP1Q9Y3P9 1069 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 GPR45Q9Y5Y3 372 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 LAMA3Q16787 3333 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 FRMPD3Q5JV73 1810 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 A0A0C4DFX4 3053 aa4.76□□□□□ -1.65
SNRNP40-205ENST00000486941 PFASO15067 1338 aa4.75□□□□□ -1.65
SNRNP40-205ENST00000486941 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
SNRNP40-205ENST00000486941 CCER2I3L3R5 266 aa4.75□□□□□ -1.65
SNRNP40-205ENST00000486941 GRM6O15303 877 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms