RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 UNC5AQ6ZN44 842 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ZNF778Q96MU6 729 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 FOXP3Q9BZS1 431 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 WWP1Q9H0M0 922 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 LIN28AQ9H9Z2 209 aaKnown RBP12.83□□□□□ -0.36
HSPG2-211ENST00000486901 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
HSPG2-211ENST00000486901 ADCY6O43306 1168 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 METTL18O95568 372 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 OSBPP22059 807 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 IGBP1P78318 339 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 TRAF1Q13077 416 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 PPM1LQ5SGD2 360 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 FBXL19Q6PCT2 694 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 CEP128Q6ZU80 1094 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 SLC7A3Q8WY07 619 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 TEX264Q9Y6I9 313 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 CAPN14A8MX76 684 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 STX16-NPEPL1H3BU86 382 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 SOX11P35716 441 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 USP46P62068 366 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 MSLNQ13421 630 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 AMHR2Q16671 573 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 HMX2A2RU54 273 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 PSAPP07602 524 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 BCAR1P56945 870 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 GRM1Q13255 1194 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 CYTH1Q15438 398 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
HSPG2-211ENST00000486901 ST13P4Q8IZP2 240 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 ZSCAN18Q8TBC5 510 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 WDR55Q9H6Y2 383 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-211ENST00000486901 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CXCL8P10145 99 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ARSAP15289 507 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ARRB2P32121 409 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 GBE1Q04446 702 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 PDK1Q15118 436 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 DLG2Q15700 870 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 FRMD7Q6ZUT3 714 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 DHDDSQ86SQ9 333 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 RXFP2Q8WXD0 754 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CGRRF1Q99675 332 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 KLHL4Q9C0H6 718 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 PLAC1Q9HBJ0 212 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CNTN3Q9P232 1028 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 INPP5FQ9Y2H2 1132 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 VCLP18206 1134 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MLH1P40692 756 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ATG16L1Q676U5 607 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CAND1Q86VP6 1230 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MYLK4Q86YV6 388 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 KCTD17Q8N5Z5 321 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ANKRD27Q96NW4 1050 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CAB39LQ9H9S4 337 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 S100A14Q9HCY8 104 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 DDX56Q9NY93 547 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 PDP2Q9P2J9 529 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 SOX13Q9UN79 622 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 APOBEC2Q9Y235 224 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 MAGEB3O15480 346 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 HCRTO43612 131 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 KRT7P08729 469 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 FGFR3P22607 806 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 RPL10P27635 214 aaKnown RBP12.81□□□□□ -0.36
HSPG2-211ENST00000486901 NUMBP49757 651 aa12.81□□□□□ -0.36
HSPG2-211ENST00000486901 CAPSQ13938 189 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms