RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
SF1-216ENST00000486867 ASNSD1Q9NWL6 643 aa13.79□□□□□ -0.2
SF1-216ENST00000486867 MARCH2Q9P0N8 246 aa13.79□□□□□ -0.2
SF1-216ENST00000486867 MRPS17Q9Y2R5 130 aaKnown RBP13.79□□□□□ -0.2
SF1-216ENST00000486867 WNT6Q9Y6F9 365 aa13.79□□□□□ -0.2
SF1-216ENST00000486867 DOCK4Q8N1I0 1966 aa13.79□□□□□ -0.2
SF1-216ENST00000486867 TRDMT1O14717 391 aaKnown RBP13.78□□□□□ -0.2
SF1-216ENST00000486867 MDM4O15151 490 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 NFATC1O95644 943 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 IGLV3-27P01718 113 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 GLI1P08151 1106 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 CHRNB2P17787 502 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 TARSP26639 723 aaKnown RBP13.78□□□□□ -0.2
SF1-216ENST00000486867 SCNN1AP37088 669 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 GABRB2P47870 512 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 NOMO3P69849 1222 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 FMO1Q01740 532 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 CDR2Q01850 454 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 GOLGA8FQ08AF8 430 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 GOLGA8DPQ0D2H9 430 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 NNTQ13423 1086 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
SF1-216ENST00000486867 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 TXNDC11Q6PKC3 985 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 MAMSTRQ6ZN01 415 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 SCUBE3Q8IX30 993 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 TMEM35BQ8NCS4 154 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 FAM3CQ92520 227 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 PPP1R13BQ96KQ4 1090 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 NOX5Q96PH1 765 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 SPAG5Q96R06 1193 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
SF1-216ENST00000486867 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
SF1-216ENST00000486867 MTF2Q9Y483 593 aaPredicted RBP13.78□□□□□ -0.2
SF1-216ENST00000486867 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 GFPT2O94808 682 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 SERPINC1P01008 464 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 IGLV3-25P01717 112 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 KLKB1P03952 638 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 CYP1A1P04798 512 aaPredicted RBP13.77□□□□□ -0.21
SF1-216ENST00000486867 CYP17A1P05093 508 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 GJA4P35212 333 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 SOX9P48436 509 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 KPNA1P52294 538 aaPredicted RBP13.77□□□□□ -0.21
SF1-216ENST00000486867 EIF4EBP2Q13542 120 aaPredicted RBP13.77□□□□□ -0.21
SF1-216ENST00000486867 TMEM196Q5HYL7 178 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 FMNL3Q8IVF7 1028 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 BBS7Q8IWZ6 715 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.21
SF1-216ENST00000486867 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
SF1-216ENST00000486867 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 OLIG1Q8TAK6 271 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 PLD4Q96BZ4 506 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 PRRX2Q99811 253 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 IER2Q9BTL4 223 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 NACA2Q9H009 215 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 ST7Q9NRC1 585 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 MARK1Q9P0L2 795 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 TJP2Q9UDY2 1190 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 STRIP2Q9ULQ0 834 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 SH3BP1Q9Y3L3 701 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
SF1-216ENST00000486867 EML5Q05BV3 1969 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 GFRA2O00451 464 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 PIK3R2O00459 728 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 HOXC11O43248 304 aaPredicted RBP13.76□□□□□ -0.21
SF1-216ENST00000486867 LATS1O95835 1130 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 MMEP08473 750 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 CHRNB1P11230 501 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 CD72P21854 359 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
SF1-216ENST00000486867 UBASH3AP57075 661 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 SNX16P57768 344 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 AMPD2Q01433 879 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 RING1Q06587 406 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 NR1H3Q13133 447 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 CCINQ13939 588 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 DHCR24Q15392 516 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 RSRC2Q7L4I2 434 aaKnown RBP13.76□□□□□ -0.21
SF1-216ENST00000486867 SLC26A9Q7LBE3 791 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 IRF2BP2Q7Z5L9 587 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 PASD1Q8IV76 773 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 SLC20A1Q8WUM9 679 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 EDEM1Q92611 657 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
SF1-216ENST00000486867 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
SF1-216ENST00000486867 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
SF1-216ENST00000486867 SLC2A13Q96QE2 648 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms