RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 DPP9Q86TI2 863 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 VPS50Q96JG6 964 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 WDR24Q96S15 920 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 PCDHAC1Q9H158 963 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 SAP30LQ9HAJ7 183 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 USP29Q9HBJ7 922 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 VPS45Q9NRW7 570 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 GAR1Q9NY12 217 aaKnown RBP6.22□□□□□ -1.41
LTN1-206ENST00000486427 KLHL13Q9P2N7 655 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 ZMYND8Q9ULU4 1186 aaPredicted RBP6.22□□□□□ -1.41
LTN1-206ENST00000486427 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 COQ9O75208 318 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 FGF18O76093 207 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 MBPP02686 304 aaPredicted RBP6.21□□□□□ -1.42
LTN1-206ENST00000486427 MYL1P05976 194 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 CDK4P11802 303 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 ARHGAP25P42331 645 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 KCNB1Q14721 858 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 MFSD13AQ14CX5 517 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 AASDHQ4L235 1098 aaPredicted RBP6.21□□□□□ -1.42
LTN1-206ENST00000486427 MRNIPQ6NTE8 343 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 SLC2A7Q6PXP3 512 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 C11orf96Q7Z7L8 435 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 TXLNBQ8N3L3 684 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 OR2C3Q8N628 320 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.21□□□□□ -1.42
LTN1-206ENST00000486427 GLIS1Q8NBF1 620 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 CCDC150Q8NCX0 1101 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 SNX27Q96L92 541 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 FZD4Q9ULV1 537 aa6.21□□□□□ -1.42
LTN1-206ENST00000486427 FAM234BA2RU67 622 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 TMEM232C9JQI7 657 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 INO80B-WBP1J3KQ70 363 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 CLIC1O00299 241 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 FYB1O15117 783 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 PECAM1P16284 738 aaPredicted RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 SLC5A2P31639 672 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 TXNL4AP83876 142 aaKnown RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 MIS18BP1Q6P0N0 1132 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 USP17L6PQ6QN14 398 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 ZNF813Q6ZN06 617 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 P3H2Q8IVL5 708 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 NGDNQ8NEJ9 315 aaKnown RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 ZNF398Q8TD17 642 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 BRI3BPQ8WY22 251 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 HS6ST2Q96MM7 605 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 SLC29A3Q9BZD2 475 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 TMEM8AQ9HCN3 771 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 RGL1Q9NZL6 768 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 TMOD4Q9NZQ9 345 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 ZNF70Q9UC06 446 aaPredicted RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 SCAF8Q9UPN6 1271 aaKnown RBP6.2□□□□□ -1.42
LTN1-206ENST00000486427 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
LTN1-206ENST00000486427 CCNT2O60583 730 aaKnown RBP6.19□□□□□ -1.42
LTN1-206ENST00000486427 BCAR3O75815 825 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 GALNSP34059 522 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 AK2P54819 239 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 SLC14A1Q13336 389 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 PICALMQ13492 652 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 KLF9Q13886 244 aaPredicted RBP6.19□□□□□ -1.42
LTN1-206ENST00000486427 DAZAP2Q15038 168 aaPredicted RBP6.19□□□□□ -1.42
LTN1-206ENST00000486427 MAP9Q49MG5 647 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 C1QL2Q7Z5L3 287 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 ABHD5Q8WTS1 349 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 CCDC138Q96M89 665 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 RNF7Q9UBF6 113 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 BTBD3Q9Y2F9 522 aa6.19□□□□□ -1.42
LTN1-206ENST00000486427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.18□□□□□ -1.42
LTN1-206ENST00000486427 OR2W5A6NFC9 320 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 KCNU1A8MYU2 1149 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 TMIGD3P0DMS9 266 aaPredicted RBP6.18□□□□□ -1.42
LTN1-206ENST00000486427 EGR1P18146 543 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 ZNF81P51508 661 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 RAE1P78406 368 aaKnown RBP6.18□□□□□ -1.42
LTN1-206ENST00000486427 CCDC15Q0P6D6 951 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 KCNJ12Q14500 433 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 ZNF268Q14587 947 aaPredicted RBP6.18□□□□□ -1.42
LTN1-206ENST00000486427 SLC5A9Q2M3M2 681 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 C4orf46Q504U0 113 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 TMTC4Q5T4D3 741 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 IZUMO3Q5VZ72 239 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 RANBP10Q6VN20 620 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 FAM71DQ8N9W8 422 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 KIAA1191Q96A73 305 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 C1QTNF7Q9BXJ2 289 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 PRSS22Q9GZN4 317 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.18□□□□□ -1.42
LTN1-206ENST00000486427 NRIP3Q9NQ35 241 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 CHST12Q9NRB3 414 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 PCDHB2Q9Y5E7 798 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 PCDHGB2Q9Y5G2 931 aa6.18□□□□□ -1.42
LTN1-206ENST00000486427 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 FCHO1O14526 889 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 TP73O15350 636 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 DRD1P21728 446 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms