RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RLN3Q8WXF3 142 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 TMEM176AQ96HP8 235 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 SPACA7Q96KW9 195 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 BBS2Q9BXC9 721 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 UBXN6Q9BZV1 441 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 BCCIPQ9P287 314 aaKnown RBP eCLIP23.59■■□□□ 1.37
SREBF1-214ENST00000486311 NUDT5Q9UKK9 219 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 ACACBO00763 2458 aa23.59■■□□□ 1.37
SREBF1-214ENST00000486311 NEDD8-MDP1E9PL57 170 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 RALAP11233 206 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 TYRP14679 529 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 RAD23BP54727 409 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 MAP7D1Q3KQU3 841 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 ZNF658Q5TYW1 1059 aaPredicted RBP23.58■■□□□ 1.37
SREBF1-214ENST00000486311 ARHGAP17Q68EM7 881 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 TPGS1Q6ZTW0 290 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 CYP2U1Q7Z449 544 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 ZC3H3Q8IXZ2 948 aaKnown RBP23.58■■□□□ 1.37
SREBF1-214ENST00000486311 HMGB4Q8WW32 186 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 GSDMAQ96QA5 445 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 CDK5RAP1Q96SZ6 601 aaKnown RBP23.58■■□□□ 1.37
SREBF1-214ENST00000486311 ARID3AQ99856 593 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 EDEM2Q9BV94 578 aa23.58■■□□□ 1.37
SREBF1-214ENST00000486311 EPG5Q9HCE0 2579 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 CNOT1A5YKK6 2376 aaKnown RBP23.57■■□□□ 1.36
SREBF1-214ENST00000486311 SLC16A3O15427 465 aaKnown RBP23.57■■□□□ 1.36
SREBF1-214ENST00000486311 DHPSP49366 369 aaPredicted RBP23.57■■□□□ 1.36
SREBF1-214ENST00000486311 BYSLQ13895 437 aaKnown RBP23.57■■□□□ 1.36
SREBF1-214ENST00000486311 MIB1Q86YT6 1006 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 ENGASEQ8NFI3 743 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 TATDN2Q93075 761 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 TSG101Q99816 390 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 LSM14BQ9BX40 385 aaKnown RBP23.57■■□□□ 1.36
SREBF1-214ENST00000486311 COQ4Q9Y3A0 265 aa23.57■■□□□ 1.36
SREBF1-214ENST00000486311 LAMA1P25391 3075 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 LNP1A1A4G5 178 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 KHNYNO15037 678 aaKnown RBP23.56■■□□□ 1.36
SREBF1-214ENST00000486311 STC2O76061 302 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 KCNA4P22459 653 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 NTSR1P30989 418 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 FKBP3Q00688 224 aaKnown RBP23.56■■□□□ 1.36
SREBF1-214ENST00000486311 CBWD6Q4V339 395 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 RAB41Q5JT25 222 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 CBWD3Q5JTY5 395 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 CBWD5Q5RIA9 395 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 LPCAT2Q7L5N7 544 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 PIGZQ86VD9 579 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 PGBD3Q8N328 593 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 SPATA20Q8TB22 786 aa23.56■■□□□ 1.36
SREBF1-214ENST00000486311 MBD1Q9UIS9 605 aaPredicted RBP23.56■■□□□ 1.36
SREBF1-214ENST00000486311 CIZ1Q9ULV3 898 aaPredicted RBP23.56■■□□□ 1.36
SREBF1-214ENST00000486311 A0A1W2PQF6 199 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 GOLGA6L4A6NEF3 574 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 MAP3K13O43283 966 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 SMC2O95347 1197 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 CISD3P0C7P0 127 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 HOXB2P14652 356 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 DCAF17Q5H9S7 520 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-214ENST00000486311 SPDYCQ5MJ68 293 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 TCERG1LQ5VWI1 586 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 EGFLAMQ63HQ2 1017 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 ANKRD40Q6AI12 368 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 ARHGAP18Q8N392 663 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 FRMD1Q8N878 549 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 ANKRD52Q8NB46 1076 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 PIGKQ92643 395 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 GTPBP4Q9BZE4 634 aaKnown RBP23.55■■□□□ 1.36
SREBF1-214ENST00000486311 ZNF510Q9Y2H8 683 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 MYOFQ9NZM1 2061 aa23.55■■□□□ 1.36
SREBF1-214ENST00000486311 C4orf47A7E2U8 309 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 PRRT4C9JH25 899 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 KLKB1P03952 638 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 GABRG2P18507 467 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 DGKGP49619 791 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 PMS1P54277 932 aaKnown RBP23.54■■□□□ 1.36
SREBF1-214ENST00000486311 COG7P83436 770 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 TOGARAM2Q6ZUX3 1019 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 ACOX2Q99424 681 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 RASAL2Q9UJF2 1139 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 FBXO10Q9UK96 956 aa23.54■■□□□ 1.36
SREBF1-214ENST00000486311 ABCA7Q8IZY2 2146 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 PATE3B3GLJ2 98 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 WASP42768 502 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 SLC8A3P57103 927 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 LRRC63Q05C16 580 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 EFEMP1Q12805 493 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 CUL2Q13617 745 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 N4BP2L1Q5TBK1 243 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-214ENST00000486311 SDE2Q6IQ49 451 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 TMEFF1Q8IYR6 380 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 CHPFQ8IZ52 775 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 SMARCE1Q969G3 411 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 P2RY11Q96G91 374 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 TIGD1Q96MW7 591 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 GABRG3Q99928 467 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 DCLK3Q9C098 648 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 CD248Q9HCU0 757 aa23.53■■□□□ 1.36
SREBF1-214ENST00000486311 EVLQ9UI08 416 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-214ENST00000486311 KMT2BQ9UMN6 2715 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms