RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 GPD2P43304 727 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 RPL34P49207 117 aaKnown RBP13.58□□□□□ -0.24
SSR4-211ENST00000486204 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
SSR4-211ENST00000486204 FANCCQ00597 558 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 RING1Q06587 406 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 NR1I3Q14994 352 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 DENND1BQ6P3S1 775 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 CEP68Q76N32 757 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 USP13Q92995 863 aaPredicted RBP13.58□□□□□ -0.24
SSR4-211ENST00000486204 CYP2S1Q96SQ9 504 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 NMUR1Q9HB89 426 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 CYTH4Q9UIA0 394 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
SSR4-211ENST00000486204 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 HEPACAM2A8MVW5 462 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 AXIN1O15169 862 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 ZNF806P0C7X5 589 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 PFKLP17858 780 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 PBX1P40424 430 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 ZXDBP98169 803 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 ZNF268Q14587 947 aaPredicted RBP13.57□□□□□ -0.24
SSR4-211ENST00000486204 CCDC6Q16204 474 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 PM20D1Q6GTS8 502 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 PSAPL1Q6NUJ1 521 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 PMF1Q6P1K2 205 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 SCD5Q86SK9 330 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 ARL14EPQ8N8R7 260 aaPredicted RBP13.57□□□□□ -0.24
SSR4-211ENST00000486204 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 EPS8L1Q8TE68 723 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 FAM3CQ92520 227 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 TTYH3Q9C0H2 523 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 RNF38Q9H0F5 515 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 ARRDC1-AS1Q9H2J1 176 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 CCSER2Q9H7U1 834 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 TRPC7Q9HCX4 862 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 OBP2AQ9NY56 170 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 CHORDC1Q9UHD1 332 aaPredicted RBP13.57□□□□□ -0.24
SSR4-211ENST00000486204 PCDHGC3Q9UN70 934 aa13.57□□□□□ -0.24
SSR4-211ENST00000486204 F5P12259 2224 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ARNTLO00327 626 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 MED7O43513 233 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 SERPINC1P01008 464 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 CKMP06732 381 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 SOX5P35711 763 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 AVPR1AP37288 418 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 RGS7P49802 495 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 TUBP50607 506 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 TKTL1P51854 596 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 SLC8A3P57103 927 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 TPM4P67936 248 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 PTK2Q05397 1052 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ADIGQ0VDE8 80 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 FOXC1Q12948 553 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 USP4Q13107 963 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 GRM2Q14416 872 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ZNF77Q15935 545 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 HEATR6Q6AI08 1181 aaKnown RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 SCML4Q8N228 414 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 DEPDC1BQ8WUY9 529 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 BAP1Q92560 729 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 E2F7Q96AV8 911 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 ULBP1Q9BZM6 244 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 KIF9Q9HAQ2 790 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 CYLDQ9NQC7 956 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 TLR8Q9NR97 1041 aaKnown RBP13.56□□□□□ -0.24
SSR4-211ENST00000486204 TDP1Q9NUW8 608 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ARHGAP26Q9UNA1 814 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
SSR4-211ENST00000486204 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
SSR4-211ENST00000486204 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 COCHO43405 550 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 GFPT2O94808 682 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 CYP11B1P15538 503 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 TCF3P15923 654 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 PSMC3P17980 439 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 HDCP19113 662 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 SPINK2P20155 84 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 SLC7A9P82251 487 aa13.55□□□□□ -0.24
SSR4-211ENST00000486204 SPEM1Q8N4L4 309 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms