RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 ARHGEF19Q8IW93 802 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 CCDC33Q8N5R6 958 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 MLKLQ8NB16 471 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 ULBP1Q9BZM6 244 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 MARK1Q9P0L2 795 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 RASAL2Q9UJF2 1139 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 ZNF510Q9Y2H8 683 aa19.32■□□□□ 0.68
PRPF40A-209ENST00000486100 FRYLO94915 3013 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 LRP3O75074 770 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 CHRM1P11229 460 aaPredicted RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 TIE1P35590 1138 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 ANP32AP39687 249 aaKnown RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 STILQ15468 1287 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 CRY1Q16526 586 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 TPGS1Q6ZTW0 290 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 RSRC2Q7L4I2 434 aaKnown RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 FAM160A2Q8N612 972 aaPredicted RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 IL17RCQ8NAC3 791 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 TSTD1Q8NFU3 115 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 KCNV2Q8TDN2 545 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 SLC35F5Q8WV83 523 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 NDRG1Q92597 394 aaKnown RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 RMDN1Q96DB5 314 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 XPO6Q96QU8 1125 aaKnown RBP19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 MED15Q96RN5 788 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 BBS2Q9BXC9 721 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 DCLK3Q9C098 648 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 MARCH2Q9P0N8 246 aa19.31■□□□□ 0.68
PRPF40A-209ENST00000486100 NEDD8-MDP1E9PL57 170 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 KLF8O95600 359 aaPredicted RBP19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 KLKB1P03952 638 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 TYRP14679 529 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 DGKEP52429 567 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 SPEM2Q0P670 501 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 BHLHA9Q7RTU4 235 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 SCML4Q8N228 414 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 ALLCQ8N6M5 410 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 TXNDC5Q8NBS9 432 aaKnown RBP19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 RBBP8NLQ8NC74 664 aaPredicted RBP19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 LOXL4Q96JB6 756 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 ZSWIM1Q9BR11 485 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 PARD6AQ9NPB6 346 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 STRIP2Q9ULQ0 834 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 USP18Q9UMW8 372 aa19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRPF40A-209ENST00000486100 SLC12A8A0AV02 714 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 TRIM24O15164 1050 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 CACNG3O60359 315 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 HMBSP08397 361 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 CHKAP35790 457 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 ZNF132P52740 706 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 EOGTQ5NDL2 527 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 GRAMD4Q6IC98 578 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 TMEM92Q6UXU6 159 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 KBTBD6Q86V97 674 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 RASSF3Q86WH2 238 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 CREBRFQ8IUR6 639 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 SIX6OS1Q8N1H7 587 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 TERB1Q8NA31 727 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 ZC3H10Q96K80 434 aaKnown RBP19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 KREMEN1Q96MU8 473 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 CNGB3Q9NQW8 809 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 OLA1Q9NTK5 396 aaKnown RBP19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 DNAJC17Q9NVM6 304 aaKnown RBP19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 CNTN6Q9UQ52 1028 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 STARD13Q9Y3M8 1113 aa19.29■□□□□ 0.68
PRPF40A-209ENST00000486100 MYH10P35580 1976 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 PRR5-ARHGAP8B1AHC4 643 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 SGK1O00141 431 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 LCP1P13796 627 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 BRD2P25440 801 aaKnown RBP19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 CORO1AP31146 461 aaKnown RBP19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 ARHGAP8P85298 464 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 LMNB2Q03252 620 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 BSPRYQ5W0U4 402 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 PMF1Q6P1K2 205 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 IRF2BP1Q8IU81 584 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 CNOT6LQ96LI5 555 aaKnown RBP19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 HSFY1Q96LI6 401 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 UBE2TQ9NPD8 197 aaPredicted RBP19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 ABCC13Q9NSE7 274 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 SEMA4GQ9NTN9 838 aa19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 AGO1Q9UL18 857 aaKnown RBP19.28■□□□□ 0.68
PRPF40A-209ENST00000486100 YJEFN3A6XGL0 299 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 E7ENQ6 273 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 M0QYV0 167 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 GABBR2O75899 941 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 ALDH1A2O94788 518 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 CALCAP01258 141 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 CISD3P0C7P0 127 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 HNRNPLP14866 589 aaKnown RBP eCLIP19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 RGS7P49802 495 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 DAOAP59103 153 aa19.27■□□□□ 0.68
PRPF40A-209ENST00000486100 PUM1Q14671 1186 aaKnown RBP eCLIP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms