RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MARCH2Q9P0N8 246 aa18.52■□□□□ 0.56
COL6A1-204ENST00000486023 DEC1Q9P2X7 70 aa18.52■□□□□ 0.56
COL6A1-204ENST00000486023 GMEB2Q9UKD1 530 aa18.52■□□□□ 0.56
COL6A1-204ENST00000486023 STRIP2Q9ULQ0 834 aa18.52■□□□□ 0.56
COL6A1-204ENST00000486023 EP300Q09472 2414 aaPredicted RBP18.52■□□□□ 0.55
COL6A1-204ENST00000486023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.51■□□□□ 0.55
COL6A1-204ENST00000486023 TULP3O75386 442 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 STC2O76061 302 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 KLF8O95600 359 aaPredicted RBP18.51■□□□□ 0.55
COL6A1-204ENST00000486023 GRIA2P42262 883 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 COG7P83436 770 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 CNGA2Q16280 664 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 PMF1Q6P1K2 205 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 KLHDC10Q6PID8 442 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 GBP6Q6ZN66 633 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 SYT13Q7L8C5 426 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 WDR5BQ86VZ2 330 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 IRF2BP1Q8IU81 584 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 DENND1CQ8IV53 801 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 ALLCQ8N6M5 410 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 USP33Q8TEY7 942 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 GBP4Q96PP9 640 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 ST7Q9NRC1 585 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
COL6A1-204ENST00000486023 SFMBT1Q9UHJ3 866 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL6A1-204ENST00000486023 INVSQ9Y283 1065 aa18.51■□□□□ 0.55
COL6A1-204ENST00000486023 YJEFN3A6XGL0 299 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 E7ENQ6 273 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 GREM1O60565 184 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 PRKCSHP14314 528 aaPredicted RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 TYRP14679 529 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 CORO1AP31146 461 aaKnown RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 DGKEP52429 567 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 MFAP3P55082 362 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 BSPRYQ5W0U4 402 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 PM20D1Q6GTS8 502 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 TXNDC5Q8NBS9 432 aaKnown RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 TSTD1Q8NFU3 115 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 ERLEC1Q96DZ1 483 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 XPO6Q96QU8 1125 aaKnown RBP18.5■□□□□ 0.55
COL6A1-204ENST00000486023 ACP6Q9NPH0 428 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 USP18Q9UMW8 372 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 ATG2BQ96BY7 2078 aa18.5■□□□□ 0.55
COL6A1-204ENST00000486023 GPR179Q6PRD1 2367 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 AXIN1O15169 862 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 THAP12O43422 761 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 RPP40O75818 363 aaKnown RBP18.49■□□□□ 0.55
COL6A1-204ENST00000486023 APBB3O95704 486 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 KLKB1P03952 638 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 CNR2P34972 360 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 EIF2DP41214 584 aaKnown RBP18.49■□□□□ 0.55
COL6A1-204ENST00000486023 WASP42768 502 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 STILQ15468 1287 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 EXOC3L4Q17RC7 722 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 C10orf76Q5T2E6 689 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 NUDT18Q6ZVK8 323 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 FMNL3Q8IVF7 1028 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 CAMKK1Q8N5S9 505 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 SLC35F5Q8WV83 523 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 KCTD13Q8WZ19 329 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 WDR35Q9P2L0 1181 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 FAM186AA6NE01 2351 aa18.49■□□□□ 0.55
COL6A1-204ENST00000486023 HOXC11O43248 304 aaPredicted RBP18.48■□□□□ 0.55
COL6A1-204ENST00000486023 MRPS21P82921 87 aaKnown RBP18.48■□□□□ 0.55
COL6A1-204ENST00000486023 SPEM2Q0P670 501 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 PKDCCQ504Y2 493 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 ANO7Q6IWH7 933 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 DENND1BQ6P3S1 775 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 FAM114A1Q8IWE2 563 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 GPT2Q8TD30 523 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 CLEC4CQ8WTT0 213 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 GOLGA1Q92805 767 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 TPSD1Q9BZJ3 242 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 DCLK3Q9C098 648 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 CNGB3Q9NQW8 809 aa18.48■□□□□ 0.55
COL6A1-204ENST00000486023 AGO1Q9UL18 857 aaKnown RBP18.48■□□□□ 0.55
COL6A1-204ENST00000486023 HELZP42694 1942 aaKnown RBP18.48■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF292O60281 2723 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 GOLGA6L22H0YM25 854 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 SGK1O00141 431 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 DCLK1O15075 740 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 GABBR2O75899 941 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 PON1P27169 355 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 GNA15P30679 374 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 HOXA6P31267 233 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 TNFRSF4P43489 277 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 ZNF132P52740 706 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 DAOAP59103 153 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 PREPLQ4J6C6 727 aaPredicted RBP18.47■□□□□ 0.55
COL6A1-204ENST00000486023 LAIR1Q6GTX8 287 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 Q6ZNB5 142 aa18.47■□□□□ 0.55
COL6A1-204ENST00000486023 TOGARAM2Q6ZUX3 1019 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms