RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MBD3O95983 291 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 AFPP02771 609 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 PAEPP09466 180 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CCDC192P0DO97 292 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 TDGF1P13385 188 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ATP1A3P13637 1013 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ARSAP15289 507 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CD58P19256 250 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SLC9A1P19634 815 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 TBXAS1P24557 533 aaPredicted RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 TARSP26639 723 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 PON1P27169 355 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 GRIK1P39086 918 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 RPS9P46781 194 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 ATP1A2P50993 1020 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 KIF11P52732 1056 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SLC5A3P53794 718 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 PITX1P78337 314 aaPredicted RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 PFKPQ01813 784 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CYP27A1Q02318 531 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 LRMPQ12912 555 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 VEPH1Q14D04 833 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CNGA2Q16280 664 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ARHGAP29Q52LW3 1261 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ZNF394Q53GI3 561 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 GPR158Q5T848 1215 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 TRNP1Q6NT89 227 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 MRPL14Q6P1L8 145 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 TRIM65Q6PJ69 517 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 LCLAT1Q6UWP7 414 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 Q6ZS52 159 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CCDC186Q7Z3E2 898 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 TRIM46Q7Z4K8 759 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 C12orf40Q86WS4 652 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CELF5Q8N6W0 485 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 ANKRD52Q8NB46 1076 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SLC2A14Q8TDB8 520 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CLEC4CQ8WTT0 213 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SLC35F5Q8WV83 523 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 IRF7Q92985 503 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ZNF775Q96BV0 537 aaPredicted RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 TMEM176AQ96HP8 235 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CYP2S1Q96SQ9 504 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 TRMT61BQ9BVS5 477 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 NAA15Q9BXJ9 866 aaKnown RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 GANQ9H2C0 597 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ATXN3LQ9H3M9 355 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 KIF9Q9HAQ2 790 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 DMAP1Q9NPF5 467 aaPredicted RBP6.04□□□□□ -1.44
CUX1-208ENST00000485792 TDP1Q9NUW8 608 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 EHD2Q9NZN4 543 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 GMIPQ9P107 970 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CALCOCO1Q9P1Z2 691 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CA14Q9ULX7 337 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 ARHGAP26Q9UNA1 814 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 SCML2Q9UQR0 700 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 KNL1Q8NG31 2342 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 NUMA1Q14980 2115 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 CEP250Q9BV73 2442 aa6.04□□□□□ -1.44
CUX1-208ENST00000485792 KANSL1LA0AUZ9 987 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PCNX2A6NKB5 2137 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 I6L893 689 aaPredicted RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 GFRA2O00451 464 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 TRIM24O15164 1050 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 TBX18O95935 607 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 FYNP06241 537 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 VDRP11473 427 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 SNRPBP14678 240 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 HNRNPLP14866 589 aaKnown RBP eCLIP6.03□□□□□ -1.44
CUX1-208ENST00000485792 BRD2P25440 801 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 EEF1GP26641 437 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 YWHAQP27348 245 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 ADORA2BP29275 332 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PTGIRP43119 386 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PLA2G4AP47712 749 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 RELBQ01201 579 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 TAF10Q12962 218 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 EIF4EBP2Q13542 120 aaPredicted RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 MLF2Q15773 248 aaPredicted RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 MAN2A1Q16706 1144 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 CRTC2Q53ET0 693 aaPredicted RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 ARHGAP15Q53QZ3 475 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 TCP11X2Q5H9J9 407 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 TCERG1LQ5VWI1 586 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 DHX40Q8IX18 779 aaKnown RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 ADGRG2Q8IZP9 1017 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 SIX5Q8N196 739 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 LINC00528Q8N1L1 170 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 WDTC1Q8N5D0 677 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 ARL14EPQ8N8R7 260 aaPredicted RBP6.03□□□□□ -1.44
CUX1-208ENST00000485792 MAB21L3Q8N8X9 362 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PDZD8Q8NEN9 1154 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 PJA1Q8NG27 643 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 BPIFB1Q8TDL5 484 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 SHC3Q92529 594 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 MSANTD3Q96H12 275 aa6.03□□□□□ -1.44
CUX1-208ENST00000485792 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms