RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 MRE11P49959 708 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 NRLP54845 237 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 SEC13P55735 322 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 SATB1Q01826 763 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 UBXN1Q04323 297 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 CCINQ13939 588 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 NAIF1Q69YI7 327 aaPredicted RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 Q6ZS52 159 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 NOX5Q96PH1 765 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 XPO6Q96QU8 1125 aaKnown RBP13.1□□□□□ -0.31
PTCD1-205ENST00000485746 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 WDR35Q9P2L0 1181 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 SLC8A2Q9UPR5 921 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 FHOD1Q9Y613 1164 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 R4GN57 208 aa13.1□□□□□ -0.31
PTCD1-205ENST00000485746 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 NEDD8-MDP1E9PL57 170 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 CAPN9O14815 690 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 LTFP02788 710 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-205ENST00000485746 UCHL3P15374 230 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 CORO1AP31146 461 aaKnown RBP13.09□□□□□ -0.31
PTCD1-205ENST00000485746 CHKAP35790 457 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 NBL1P41271 181 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SLC6A11P48066 632 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SNX16P57768 344 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 KDSRQ06136 332 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 TMEM25Q86YD3 366 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SCML4Q8N228 414 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 BHMTQ93088 406 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-205ENST00000485746 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SYNCQ9H7C4 482 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
PTCD1-205ENST00000485746 ARHGEF4Q9NR80 690 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 DEC1Q9P2X7 70 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
PTCD1-205ENST00000485746 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-205ENST00000485746 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 CYBBP04839 570 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 NCAM1P13591 858 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 CLCN1P35523 988 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 OPRD1P41143 372 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 EIF2DP41214 584 aaKnown RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 GRIA2P42262 883 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 TPM4P67936 248 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 GAS6Q14393 721 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 MEA1Q16626 185 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 KLHL40Q2TBA0 621 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 MAMSTRQ6ZN01 415 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 STK32AQ8WU08 396 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 PRMT8Q9NR22 394 aaPredicted RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
PTCD1-205ENST00000485746 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
PTCD1-205ENST00000485746 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 E5RJQ4 531 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 KAT7O95251 611 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 TYRP14679 529 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 KLK7P49862 253 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 ZNF165P49910 485 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 PDCLQ13371 301 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 SYCP1Q15431 976 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 C2orf27AQ580R0 203 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 OR6B2Q6IFH4 312 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 BHLHA9Q7RTU4 235 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 UNC45BQ8IWX7 931 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 FAM71AQ8IYT1 594 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
PTCD1-205ENST00000485746 ACDQ96AP0 544 aa13.07□□□□□ -0.32
PTCD1-205ENST00000485746 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms