RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SLC25A52Q3SY17 297 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 SLFN11Q7Z7L1 901 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 KIAA1328Q86T90 577 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 TPCN2Q8NHX9 752 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 FAM149B1Q96BN6 582 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 ZFRQ96KR1 1074 aaKnown RBP16.55■□□□□ 0.24
APOE-205ENST00000485628 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 RNF38Q9H0F5 515 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 SMOC2Q9H3U7 446 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 CCSER2Q9H7U1 834 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 CDH22Q9UJ99 828 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 PRUNE2Q8WUY3 3088 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 A0A1W2PRU2 124 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 COCHO43405 550 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 TLR5O60602 858 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 TBX18O95935 607 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 IGLV3-27P01718 113 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 NCAM1P13591 858 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
APOE-205ENST00000485628 NNTQ13423 1086 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 BTBD8Q5XKL5 378 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
APOE-205ENST00000485628 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 ITFG1Q8TB96 612 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
APOE-205ENST00000485628 EDEM1Q92611 657 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 SLC39A13Q96H72 371 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 SLC22A12Q96S37 553 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 CDK5RAP1Q96SZ6 601 aaKnown RBP16.54■□□□□ 0.24
APOE-205ENST00000485628 CNPY3Q9BT09 278 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 SLC46A2Q9BY10 475 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 OLA1Q9NTK5 396 aaKnown RBP16.54■□□□□ 0.24
APOE-205ENST00000485628 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 ZMYM5Q9UJ78 669 aa16.54■□□□□ 0.24
APOE-205ENST00000485628 MYO1FO00160 1098 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 KRT86O43790 486 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 PROSCO94903 275 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 RALAP11233 206 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 MYL4P12829 197 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 GPD1P21695 349 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 MAN1A1P33908 653 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 SLC7A9P82251 487 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 ZXDBP98169 803 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 STXBP5Q5T5C0 1151 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 TXNDC8Q6A555 127 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 DCUN1D2Q6PH85 259 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 CYP4V2Q6ZWL3 525 aaPredicted RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 BTBD6Q96KE9 485 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 KLF16Q9BXK1 252 aaPredicted RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 TMEM51Q9NW97 253 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
APOE-205ENST00000485628 HELZP42694 1942 aaKnown RBP16.53■□□□□ 0.24
APOE-205ENST00000485628 C5orf42Q9H799 3197 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 IRAK2O43187 625 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CCP110O43303 1012 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 GREM1O60565 184 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 BUB1BO60566 1050 aaPredicted RBP16.52■□□□□ 0.24
APOE-205ENST00000485628 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.24
APOE-205ENST00000485628 TCF3P15923 654 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 GJA1P17302 382 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CEBPBP17676 345 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 ATP5C1P36542 298 aaKnown RBP16.52■□□□□ 0.24
APOE-205ENST00000485628 MTHFRP42898 656 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CXCR3P49682 368 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 HDAC4P56524 1084 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CYP4F8P98187 520 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 TEAD2Q15562 447 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 C15orf59Q2T9L4 293 aaPredicted RBP16.52■□□□□ 0.24
APOE-205ENST00000485628 RAB6CQ53S08 254 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 ATAT1Q5SQI0 421 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 ARTNQ5T4W7 220 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 C11orf63Q6NUN7 778 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 TAC4Q86UU9 113 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 ADAMTS19Q8TE59 1207 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 MRPS31Q92665 395 aaKnown RBP16.52■□□□□ 0.24
APOE-205ENST00000485628 GOLGA1Q92805 767 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 ZSWIM3Q96MP5 696 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 TBCBQ99426 244 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 APOL5Q9BWW9 433 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 PIDD1Q9HB75 910 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 DNMT3LQ9UJW3 386 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 NUDT5Q9UKK9 219 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.24
APOE-205ENST00000485628 CAPN6Q9Y6Q1 641 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms