RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RAB44Q7Z6P3 723 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 ACOT1Q86TX2 421 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 CHPFQ8IZ52 775 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 MINDY1Q8N5J2 469 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 ZCCHC14Q8WYQ9 949 aaKnown RBP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 FOXJ1Q92949 421 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 NACA2Q9H009 215 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 SDCBP2Q9H190 292 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 DNAJC17Q9NVM6 304 aaKnown RBP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 SUSD2Q9UGT4 822 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 DSPP15924 2871 aaKnown RBP13.75□□□□□ -0.21
HDAC6-227ENST00000485102 KNTC1P50748 2209 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 FREM2Q5SZK8 3169 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 LAMA5O15230 3695 aa13.75□□□□□ -0.21
HDAC6-227ENST00000485102 ATXN2Q99700 1313 aaKnown RBP13.74□□□□□ -0.21
HDAC6-227ENST00000485102 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-227ENST00000485102 PRRT4C9JH25 899 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 HHLA1C9JL84 531 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 IKBKBO14920 756 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 NPC1O15118 1278 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 BEST1O76090 585 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 TBX18O95935 607 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 KIAA1211LQ6NV74 962 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 Q6ZNB5 142 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 DNASE2BQ8WZ79 361 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 MRGPRX1Q96LB2 322 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 ACOX2Q99424 681 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 HNRNPABQ99729 332 aaKnown RBP13.74□□□□□ -0.21
HDAC6-227ENST00000485102 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 ZDHHC5Q9C0B5 715 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 SLC39A2Q9NP94 309 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 LSM7Q9UK45 103 aaKnown RBP13.74□□□□□ -0.21
HDAC6-227ENST00000485102 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
HDAC6-227ENST00000485102 APC2O95996 2303 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 POLR2DO15514 142 aaKnown RBP13.73□□□□□ -0.21
HDAC6-227ENST00000485102 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
HDAC6-227ENST00000485102 PSEN1P49768 467 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 NDST1P52848 882 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 FAM193AP78312 1265 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 INCA1Q0VD86 236 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 ENPP2Q13822 863 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 TMC2Q8TDI7 906 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 HSPA12BQ96MM6 686 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 GTPBP2Q9BX10 602 aaKnown RBP13.73□□□□□ -0.21
HDAC6-227ENST00000485102 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.21
HDAC6-227ENST00000485102 OSER1Q9NX31 292 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF510Q9Y2H8 683 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
HDAC6-227ENST00000485102 FAM200BP0CF97 657 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 C7P10643 843 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 IRF1P10914 325 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 CCDC130P13994 396 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 GNSP15586 552 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
HDAC6-227ENST00000485102 ACO1P21399 889 aaKnown RBP13.72□□□□□ -0.21
HDAC6-227ENST00000485102 WASP42768 502 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 DGKGP49619 791 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 E2F5Q15329 346 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 WDR45BQ5MNZ6 344 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 CLEC20AQ6ZU45 233 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 TOGARAM2Q6ZUX3 1019 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 DEFB119Q8N690 84 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 CADM4Q8NFZ8 388 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 ADAMTS14Q8WXS8 1223 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 KCTD10Q9H3F6 313 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 FSCN3Q9NQT6 498 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 USP36Q9P275 1121 aaKnown RBP13.72□□□□□ -0.21
HDAC6-227ENST00000485102 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
HDAC6-227ENST00000485102 TAF4O00268 1085 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 PDXKO00764 312 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 MAPK13O15264 365 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 KLRC4O43908 158 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 NDUFS2O75306 463 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 PENKP01210 267 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-227ENST00000485102 ZNF883P0CG24 379 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CASP1P29466 404 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CD6P30203 668 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 CHKAP35790 457 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 ASPAP45381 313 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 KIF11P52732 1056 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 RING1Q06587 406 aa13.71□□□□□ -0.21
HDAC6-227ENST00000485102 ENPEPQ07075 957 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms