RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 RNF14Q9UBS8 474 aa21.34■■□□□ 1.01
VCPKMT-203ENST00000484763 CEP104O60308 925 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 LRG1P02750 347 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 ZFYVE27Q5T4F4 411 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 SEL1L2Q5TEA6 688 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 CCDC181Q5TID7 509 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 TXNRD3NBQ6F5E7 133 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 SCYL2Q6P3W7 929 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 DQX1Q8TE96 717 aaKnown RBP21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 RNF139Q8WU17 664 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 PEBP4Q96S96 227 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 PRO3102Q9H379 93 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 FAM204AQ9H8W3 233 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 OSER1Q9NX31 292 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 CALCOCO1Q9P1Z2 691 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 ASB3Q9Y575 518 aa21.33■■□□□ 1.01
VCPKMT-203ENST00000484763 CLASP2O75122 1294 aaKnown RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 ZDHHC11BP0C7U3 371 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 RALAP11233 206 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 DEUP1Q05D60 604 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 CKAP4Q07065 602 aaKnown RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 ZNF211Q13398 564 aaPredicted RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 SMTNL2Q2TAL5 461 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 RTL10Q7L3V2 364 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 EXD1Q8NHP7 514 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 SMOC2Q9H3U7 446 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 UXTQ9UBK9 157 aaPredicted RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 SYNJ2BP-COX16A0A087WUM0 186 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 F9P00740 461 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 KRT1P04264 644 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 ATXN1P54253 815 aaKnown RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 NME3Q13232 169 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 BOLA3Q53S33 107 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 ODF2Q5BJF6 829 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 CYP4V2Q6ZWL3 525 aaPredicted RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 RSRC2Q7L4I2 434 aaKnown RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 DNAJB7Q7Z6W7 309 aaPredicted RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 TAC4Q86UU9 113 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 RASGEF1CQ8N431 466 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 ADAM32Q8TC27 787 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 RBM41Q96IZ5 413 aaKnown RBP21.32■■□□□ 1
VCPKMT-203ENST00000484763 MS4A14Q96JA4 679 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 PLEKHA4Q9H4M7 779 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 DDIT4Q9NX09 232 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 COX16Q9P0S2 106 aa21.32■■□□□ 1
VCPKMT-203ENST00000484763 ZRANB2O95218 330 aaKnown RBP eCLIP21.31■■□□□ 1
VCPKMT-203ENST00000484763 PYGMP11217 842 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 GBP1P32455 592 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 PAFAH1B1P43034 410 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 ATP13A4Q4VNC1 1196 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 KCNT1Q5JUK3 1230 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 MSANTD2Q6P1R3 559 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 ACTRT1Q8TDG2 376 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 TEKT4Q8WW24 435 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 ZNF512Q96ME7 567 aaPredicted RBP21.31■■□□□ 1
VCPKMT-203ENST00000484763 MAN1C1Q9NR34 630 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 OLA1Q9NTK5 396 aaKnown RBP21.31■■□□□ 1
VCPKMT-203ENST00000484763 PIGVQ9NUD9 493 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 KLHL11Q9NVR0 708 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.31■■□□□ 1
VCPKMT-203ENST00000484763 MYO7AQ13402 2215 aa21.31■■□□□ 1
VCPKMT-203ENST00000484763 EPOPA6NHQ4 379 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 PGRMC1O00264 195 aaKnown RBP21.3■■□□□ 1
VCPKMT-203ENST00000484763 MDM4O15151 490 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 IGLV3-25P01717 112 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 RARAP10276 462 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 RARGP13631 454 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 PPM1LQ5SGD2 360 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 SNX30Q5VWJ9 437 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 SND1Q7KZF4 910 aaKnown RBP eCLIP21.3■■□□□ 1
VCPKMT-203ENST00000484763 FAM131BQ86XD5 332 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 CCDC50Q8IVM0 306 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 RCOR2Q8IZ40 523 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 ELMOD1Q8N336 334 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 CEP112Q8N8E3 955 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 ACSF2Q96CM8 615 aaPredicted RBP21.3■■□□□ 1
VCPKMT-203ENST00000484763 TTC7AQ9ULT0 858 aaPredicted RBP21.3■■□□□ 1
VCPKMT-203ENST00000484763 TRANK1O15050 2925 aa21.3■■□□□ 1
VCPKMT-203ENST00000484763 RIOK3O14730 519 aaKnown RBP21.29■■□□□ 1
VCPKMT-203ENST00000484763 PPP3CCP48454 512 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 CLUL1Q15846 466 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 HSPH1Q92598 858 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 CASP10Q92851 521 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 CDK5RAP1Q96SZ6 601 aaKnown RBP21.29■■□□□ 1
VCPKMT-203ENST00000484763 SNRNP25Q9BV90 132 aaKnown RBP21.29■■□□□ 1
VCPKMT-203ENST00000484763 WDR6Q9NNW5 1121 aaKnown RBP21.29■■□□□ 1
VCPKMT-203ENST00000484763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.29■■□□□ 1
VCPKMT-203ENST00000484763 TRPM5Q9NZQ8 1165 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 DPP7Q9UHL4 492 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 LRRD1A4D1F6 860 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 IRAK2O43187 625 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 EPCAMP16422 314 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 ERMARDQ5T6L9 678 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 AADACL2Q6P093 401 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 ZNF276Q8N554 614 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 CCDC185Q8N715 623 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 SLC22A17Q8WUG5 538 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 HDAC7Q8WUI4 952 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 SERPINB11Q96P15 392 aa21.29■■□□□ 1
VCPKMT-203ENST00000484763 NAP1L3Q99457 506 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms