RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZNF771Q7L3S4 317 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 BNIPLQ7Z465 357 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM76AQ8TAV0 307 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 DPF3Q92784 378 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 ACBD6Q9BR61 282 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 DHX35Q9H5Z1 703 aaKnown RBP9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 UBN1Q9NPG3 1134 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 COX16Q9P0S2 106 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 MFHAS1Q9Y4C4 1052 aa9.21□□□□□ -0.94
CDC42SE1-204ENST00000483763 A0A0C4DFX4 3053 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TDRD15B5MCY1 1934 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 EOMESO95936 686 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 MYZAPP0CAP1 466 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 RPL22P35268 128 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PGFP49763 221 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC8A3P57103 927 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 LMNB2Q03252 620 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 KRT81Q14533 505 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLMAPQ14BN4 828 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 FASTKD3Q14CZ7 662 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 DPYSL2Q16555 572 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 INTS6LQ5JSJ4 861 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 RNASEH2BQ5TBB1 312 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 ANKRD22Q5VYY1 191 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 DENND2CQ68D51 928 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 OVOS1Q6IE37 1185 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 DCLRE1AQ6PJP8 1040 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 GLB1LQ6UWU2 654 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 COLGALT2Q8IYK4 626 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SIX6OS1Q8N1H7 587 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NETO2Q8NC67 525 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SCAMP5Q8TAC9 235 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TEKT4Q8WW24 435 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 P3H4Q92791 437 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NPY6RQ99463 290 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 MAK16Q9BXY0 300 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 USP29Q9HBJ7 922 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 CSNK1G1Q9HCP0 422 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PIGVQ9NUD9 493 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 ETNK2Q9NVF9 386 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 HEY1Q9Y5J3 304 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TTC3P53804 2025 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TRIOBPQ9H2D6 2365 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TCRBV7S3A2A0A539 114 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SMIM23A6NLE4 172 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 GOLGA8MH3BSY2 632 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 M0QYT0 321 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 ENPP3O14638 875 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 DNALI1O14645 258 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SKIP12755 728 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SELPP16109 830 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SYN1P17600 705 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PCSK1P29120 753 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLCO1A2P46721 670 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SULT1E1P49888 294 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 BCAR1P56945 870 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 DAOAP59103 153 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 GBE1Q04446 702 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NME3Q13232 169 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PDK2Q15119 407 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NOMO1Q15155 1222 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 KRT71Q3SY84 523 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NOMO2Q5JPE7 1267 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SPDYCQ5MJ68 293 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SYCP2LQ5T4T6 812 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC9A4Q6AI14 798 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 EPS8L3Q8TE67 593 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAF2Q96CS3 445 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 C9orf72Q96LT7 481 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC2A13Q96QE2 648 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PCDH9Q9HC56 1237 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 CWC15Q9P013 229 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 OGDHLQ9ULD0 1010 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 AP4E1Q9UPM8 1137 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PRG3Q9Y2Y8 225 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 NR2E3Q9Y5X4 410 aa9.2□□□□□ -0.94
CDC42SE1-204ENST00000483763 PQBP1O60828 265 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 BANF1O75531 89 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 DAB1O75553 588 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 TTC4O95801 387 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 GOT1P17174 413 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 CYP2F1P24903 491 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 HPDP32754 393 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 NOS2P35228 1153 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 IFFO1Q0D2I5 559 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 MAP7D3Q8IWC1 876 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 STKLD1Q8NE28 680 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 CPT1BQ92523 772 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 EDEM1Q92611 657 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 SMARCD1Q96GM5 515 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 SCLYQ96I15 445 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 B3GALT6Q96L58 329 aa9.19□□□□□ -0.94
CDC42SE1-204ENST00000483763 CSPG4P5Q96PW8 444 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms