RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CENPIQ92674 756 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-205ENST00000482968 TRMT2BQ96GJ1 504 aaKnown RBP15.69■□□□□ 0.1
PHGDH-205ENST00000482968 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
PHGDH-205ENST00000482968 ZNF334Q9HCZ1 680 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-205ENST00000482968 UXTQ9UBK9 157 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-205ENST00000482968 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
PHGDH-205ENST00000482968 PCDHA3Q9Y5H8 950 aa15.69■□□□□ 0.1
PHGDH-205ENST00000482968 COL4A4P53420 1690 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-205ENST00000482968 MIF4GDA9UHW6 222 aaKnown RBP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 DDX3YO15523 660 aaKnown RBP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 SRGAP2O75044 1071 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 TRUB2O95900 331 aaKnown RBP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 TBX18O95935 607 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 ZDHHC11BP0C7U3 371 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 RALAP11233 206 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 CTNNA1P35221 906 aaKnown RBP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 MARCKSL1P49006 195 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 DEUP1Q05D60 604 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 ATP13A4Q4VNC1 1196 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 PAPD7Q5XG87 772 aaKnown RBP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 TXNRD3NBQ6F5E7 133 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 RTL10Q7L3V2 364 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 STRADAQ7RTN6 431 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 RHOT1Q8IXI2 618 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 HS6ST3Q8IZP7 471 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 UBL4BQ8N7F7 174 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 PDZD8Q8NEN9 1154 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 ZWILCHQ9H900 591 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHGDH-205ENST00000482968 DDIT4Q9NX09 232 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 RRN3Q9NYV6 651 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 CLIC5Q9NZA1 410 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 TRPM5Q9NZQ8 1165 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 DPP7Q9UHL4 492 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 USP18Q9UMW8 372 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 SNX12Q9UMY4 172 aa15.68■□□□□ 0.1
PHGDH-205ENST00000482968 CCDC66A2RUB6 948 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 ZNF840PA6NDX5 716 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 KCNK3O14649 394 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 IL1R2P27930 398 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PCK1P35558 622 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PEX5P50542 639 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 DMTNQ08495 405 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 HADHQ16836 314 aaKnown RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 ZFYVE27Q5T4F4 411 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 OTUD1Q5VV17 481 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 DQX1Q8TE96 717 aaKnown RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 HDAC7Q8WUI4 952 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 OVCA2Q8WZ82 227 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 ALG3Q92685 438 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 CASP10Q92851 521 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PPP2R3CQ969Q6 453 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 CCSER2Q9H7U1 834 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 FAM204AQ9H8W3 233 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 HCFC1R1Q9NWW0 138 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 SAR1BQ9Y6B6 198 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 DOCK6Q96HP0 2047 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PRPSAP2O60256 369 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 ENDOD1O94919 500 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 F11P03951 625 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 CTNNA2P26232 953 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 SLC25A11Q02978 314 aaKnown RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 SMTNL2Q2TAL5 461 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 KCNT1Q5JUK3 1230 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 C10orf120Q5SQS8 335 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 TMEM150AQ86TG1 271 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 TAC4Q86UU9 113 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 FAM131BQ86XD5 332 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 ANKRD7Q92527 254 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PEBP4Q96S96 227 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 OSBPL9Q96SU4 736 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 NSUN3Q9H649 340 aaKnown RBP15.67■□□□□ 0.1
PHGDH-205ENST00000482968 PIGVQ9NUD9 493 aa15.67■□□□□ 0.1
PHGDH-205ENST00000482968 TRIOBPQ9H2D6 2365 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 MDM4O15151 490 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 ZNF185O15231 689 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 PSTPIP1O43586 416 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 TLR5O60602 858 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 TADA3O75528 432 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 MYL4P12829 197 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 PTPN2P17706 415 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 GABRR2P28476 465 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 GBP1P32455 592 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 RDXP35241 583 aaKnown RBP15.66■□□□□ 0.1
PHGDH-205ENST00000482968 PPP3CCP48454 512 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 RWDD2BP57060 319 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 AMPD2Q01433 879 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 EFEMP1Q12805 493 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 GRIN2CQ14957 1233 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 PABPC1LQ4VXU2 614 aaKnown RBP15.66■□□□□ 0.1
PHGDH-205ENST00000482968 TCEAL5Q5H9L2 206 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 SNX30Q5VWJ9 437 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 ELMSAN1Q6PJG2 1045 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 BNIPLQ7Z465 357 aa15.66■□□□□ 0.1
PHGDH-205ENST00000482968 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms