RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 STBD1O95210 358 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 NAT2P11245 290 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CXCR5P32302 372 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 IGFALSP35858 605 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 GCLMP48507 274 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 LIG4P49917 911 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 SLC26A2P50443 739 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PDE6CP51160 858 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 SCNN1BP51168 640 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 POLGP54098 1239 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 SLC7A5Q01650 507 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PRKCEQ02156 737 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CYP24A1Q07973 514 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PPP3CAQ08209 521 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 FAPQ12884 760 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 RLFQ13129 1914 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 DHX34Q14147 1143 aaKnown RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 PSMD6Q15008 389 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 UGCGQ16739 394 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 ARHGAP44Q17R89 818 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 OVOS1Q6IE37 1185 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 LEKR1Q6ZMV7 388 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 MAEAQ7L5Y9 396 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CROCCP2Q86T23 111 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 CD302Q8IX05 232 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 ANKRD35Q8N283 1001 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 KCT2Q8NC54 265 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 NAXEQ8NCW5 288 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 LNX1Q8TBB1 728 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 AFAP1L1Q8TED9 768 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 TCP11Q8WWU5 503 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 DCPSQ96C86 337 aaKnown RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 BICD1Q96G01 975 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 FNBP1Q96RU3 617 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PACSIN1Q9BY11 444 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 WNT8AQ9H1J5 351 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PORCNQ9H237 461 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PCIF1Q9H4Z3 704 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 TAF1DQ9H5J8 278 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 RETREG1Q9H6L5 497 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 SSU72Q9NP77 194 aaKnown RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 CRTAC1Q9NQ79 661 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 RASSF1Q9NS23 344 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 RAB20Q9NX57 234 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 GGA3Q9NZ52 723 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.16□□□□□ -1.1
SNX13-208ENST00000482558 RASAL2Q9UJF2 1139 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 GTF3C4Q9UKN8 822 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PCDHB10Q9UN67 800 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 RIPK3Q9Y572 518 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 PCDHGB3Q9Y5G1 929 aa8.16□□□□□ -1.1
SNX13-208ENST00000482558 DICER1Q9UPY3 1922 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 LOC285556D6RIA3 1793 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 RPS6KA5O75582 802 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 MT-CO1P00395 513 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 TFRCP02786 760 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 FTLP02792 175 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 JMJD7P0C870 316 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 HSD3B1P14060 373 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 EDNRBP24530 442 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 ADSSP30520 456 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 NTF4P34130 210 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 SLC1A1P43005 524 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.17e-6■■■■□ 23
SNX13-208ENST00000482558 ALDH5A1P51649 535 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 ZNF143P52747 638 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 DRG2P55039 364 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 CDR2Q01850 454 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 MXD4Q14582 209 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 ZNF460Q14592 562 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 PLS1Q14651 629 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 EMC2Q15006 297 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 HEATR6Q6AI08 1181 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 LRIG3Q6UXM1 1119 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 ZPBP2Q6X784 338 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 UBE2R2Q712K3 238 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 FASTKD5Q7L8L6 764 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 PNMA8AQ86V59 439 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 ERO1BQ86YB8 467 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 CILP2Q8IUL8 1156 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 HID1Q8IV36 788 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 METTL13Q8N6R0 699 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 FAM76AQ8TAV0 307 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 ISL2Q96A47 359 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 ACSF2Q96CM8 615 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 HSPBAP1Q96EW2 488 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 FAXDC2Q96IV6 333 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 VCPIP1Q96JH7 1222 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 PPM1MQ96MI6 270 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 KRT12Q99456 494 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 POLR3FQ9H1D9 316 aaPredicted RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 C2orf40Q9H1Z8 148 aa8.15□□□□□ -1.1
SNX13-208ENST00000482558 DHX33Q9H6R0 707 aaKnown RBP8.15□□□□□ -1.1
SNX13-208ENST00000482558 AZI2Q9H6S1 392 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms