RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DDCP20711 480 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 MAPK3P27361 379 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 ATP5OP48047 213 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 HK3P52790 923 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 SLC12A3P55017 1021 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 CTXN1P60606 82 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 CCNA1P78396 465 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 PTH1RQ03431 593 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 TLE2Q04725 743 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ACTN3Q08043 901 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 LRMPQ12912 555 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 NFE2L1Q14494 772 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 LASP1Q14847 261 aaKnown RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 CCDC183Q5T5S1 534 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ACAD10Q6JQN1 1059 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 MFSD5Q6N075 450 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 TAF2Q6P1X5 1199 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 MTFR2Q6P444 385 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ARHGAP11AQ6P4F7 1023 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 IYDQ6PHW0 289 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 FAM111BQ6SJ93 734 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 GADL1Q6ZQY3 521 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 LURAP1LQ8IV03 231 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 TSPYL6Q8N831 410 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 FBXO30Q8TB52 745 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 MDM1Q8TC05 714 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 IFI44Q8TCB0 444 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 KIAA1524Q8TCG1 905 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 BRI3BPQ8WY22 251 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 APIPQ96GX9 242 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 VPS39Q96JC1 886 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 C16orf45Q96MC5 204 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 COG8Q96MW5 612 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 SAMD11Q96NU1 681 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 RBM15Q96T37 977 aaKnown RBP eCLIP4.45□□□□□ -1.7
VPS41-212ENST00000482217 MPHOSPH9Q99550 1183 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ZPBPQ9BS86 351 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 PLA2G12BQ9BX93 195 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 VPS37BQ9H9H4 285 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 INTS10Q9NVR2 710 aaKnown RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 C5AR2Q9P296 337 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 PTBP2Q9UKA9 531 aaKnown RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 PADI4Q9UM07 663 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 SCAF8Q9UPN6 1271 aaKnown RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 STXBP5LQ9Y2K9 1186 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 SNX8Q9Y5X2 465 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 SLC30A1Q9Y6M5 507 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ZNF536O15090 1300 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 BRD4O60885 1362 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 CYP2D7A0A087X1C5 515 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 A0A088AWK7 358 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ARPC4-TTLL3A0A0A6YYG9 625 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 FAM234BA2RU67 622 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 AGAP14A8MT82 685 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 B5MCH6 92 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 UBXN8O00124 270 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SYT5O00445 386 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 APOL1O14791 398 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CCP110O43303 1012 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 STX6O43752 255 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 KERAO60938 352 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TBCAO75347 108 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 E2F6O75461 281 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 RAD17O75943 681 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 BEST1O76090 585 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CAMTA2O94983 1202 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TNFRSF6BO95407 300 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 A1BGP04217 495 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TUBB4AP04350 444 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CYP1A2P05177 515 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SNRPA1P09661 255 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 FTH1P19P0C7X4 201 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SRGAP2BP0DMP2 458 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 HOXA11P31270 313 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 MSH2P43246 934 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 MAP2K6P52564 334 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ARF3P61204 181 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 PSMC6P62333 389 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 RBP5P82980 135 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ARF1P84077 181 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 BEX3Q00994 111 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CREB5Q02930 508 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TLE1Q04724 770 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 AIMP1Q12904 312 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 COASYQ13057 564 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 NOGQ13253 232 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ACVR2BQ13705 512 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 GRM7Q14831 915 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ADIPOQQ15848 244 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TMEM266Q2M3C6 531 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 FLYWCH1Q4VC44 716 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 KHDC1Q4VXA5 237 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 CEP55Q53EZ4 464 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 OTUD7BQ6GQQ9 843 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SULT6B1Q6IMI4 303 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms