RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 TUBP50607 506 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 AIF1P55008 147 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 HDAC4P56524 1084 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 EIF4EBP2Q13542 120 aaPredicted RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 CDO1Q16878 200 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 PPM1LQ5SGD2 360 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 SH3PXD2AQ5TCZ1 1133 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 PSTKQ8IV42 348 aaKnown RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 RCOR2Q8IZ40 523 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 RASGEF1CQ8N431 466 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 STKLD1Q8NE28 680 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 EDEM1Q92611 657 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 ALG3Q92685 438 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 MRPL38Q96DV4 380 aaKnown RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 SMOC2Q9H3U7 446 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
IFT88-206ENST00000482172 TTC7AQ9ULT0 858 aaPredicted RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 MAGED2Q9UNF1 606 aaPredicted RBP13.04□□□□□ -0.32
IFT88-206ENST00000482172 MYO16Q9Y6X6 1858 aa13.04□□□□□ -0.32
IFT88-206ENST00000482172 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 TMEM265A0A087WTH1 108 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 MDM4O15151 490 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 ZRANB2O95218 330 aaKnown RBP eCLIP13.03□□□□□ -0.32
IFT88-206ENST00000482172 PAPLNO95428 1278 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 TCF4P15884 667 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 COPS2P61201 443 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 DEUP1Q05D60 604 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 NNTQ13423 1086 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 DUSP6Q16828 381 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 DAB2IPQ5VWQ8 1189 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 DQX1Q8TE96 717 aaKnown RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 COG1Q8WTW3 980 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 NTAN1Q96AB6 310 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 ZNF512Q96ME7 567 aaPredicted RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 TLE6Q9H808 572 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 ZDHHC7Q9NXF8 308 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
IFT88-206ENST00000482172 ZNF638Q14966 1978 aaKnown RBP13.03□□□□□ -0.32
IFT88-206ENST00000482172 ZNF840PA6NDX5 716 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 SRGAP2O75044 1071 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 FGF19O95750 216 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 RARAP10276 462 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 RARGP13631 454 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 IL1R2P27930 398 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CXCR5P32302 372 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CETN2P41208 172 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CXCR3P49682 368 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 PGFP49763 221 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CKAP4Q07065 602 aaKnown RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 ERMARDQ5T6L9 678 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 SEL1L2Q5TEA6 688 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CYP4V2Q6ZWL3 525 aaPredicted RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
IFT88-206ENST00000482172 RSRC2Q7L4I2 434 aaKnown RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 TAC4Q86UU9 113 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CREG2Q8IUH2 290 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 FAM71BQ8TC56 605 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 GDPD5Q8WTR4 605 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 SERPINB11Q96P15 392 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 NAP1L3Q99457 506 aaPredicted RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 FAM204AQ9H8W3 233 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 WDR6Q9NNW5 1121 aaKnown RBP13.02□□□□□ -0.33
IFT88-206ENST00000482172 DDIT4Q9NX09 232 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
IFT88-206ENST00000482172 ZNF487B1APH4 448 aa13.01□□□□□ -0.33
IFT88-206ENST00000482172 ZNF185O15231 689 aa13.01□□□□□ -0.33
IFT88-206ENST00000482172 IRAK2O43187 625 aa13.01□□□□□ -0.33
IFT88-206ENST00000482172 CEP104O60308 925 aa13.01□□□□□ -0.33
IFT88-206ENST00000482172 F11P03951 625 aa13.01□□□□□ -0.33
IFT88-206ENST00000482172 SLC2A3P11169 496 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms