RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 DCLK2Q8N568 766 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 RNF139Q8WU17 664 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 UCMAQ8WVF2 138 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 IRGQQ8WZA9 623 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 SEMA4DQ92854 862 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 RMDN1Q96DB5 314 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 FBRSL1Q9HCM7 1045 aaKnown RBP12.02□□□□□ -0.49
CCM2-213ENST00000480658 ABCC13Q9NSE7 274 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 BCCIPQ9P287 314 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCM2-213ENST00000480658 DACH1Q9UI36 760 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCM2-213ENST00000480658 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 NEDD8-MDP1E9PL57 170 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 MED7O43513 233 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 ZNF217O75362 1048 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 FBXO21O94952 628 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 AFPP02771 609 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 ZNF806P0C7X5 589 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 TYRP14679 529 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 HOXD12P35452 270 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 TKTL1P51854 596 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 SEC13P55735 322 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 DMWDQ09019 674 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 EIF4HQ15056 248 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 AASDHQ4L235 1098 aaPredicted RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 C10orf76Q5T2E6 689 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 PKN3Q6P5Z2 889 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 GPRIN1Q7Z2K8 1008 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 MIB1Q86YT6 1006 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 CPXM2Q8N436 756 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 ZNF513Q8N8E2 541 aaPredicted RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 SLC2A11Q9BYW1 496 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 DNAJC17Q9NVM6 304 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 MARCH2Q9P0N8 246 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 RWDD2AQ9UIY3 292 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 CTNND2Q9UQB3 1225 aa12.01□□□□□ -0.49
CCM2-213ENST00000480658 HBS1LQ9Y450 684 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
CCM2-213ENST00000480658 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
CCM2-213ENST00000480658 NTSR1P30989 418 aa12□□□□□ -0.49
CCM2-213ENST00000480658 GBP1P32455 592 aa12□□□□□ -0.49
CCM2-213ENST00000480658 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
CCM2-213ENST00000480658 KIR2DL1P43626 348 aaPredicted RBP12□□□□□ -0.49
CCM2-213ENST00000480658 DGKGP49619 791 aa12□□□□□ -0.49
CCM2-213ENST00000480658 SNX16P57768 344 aa12□□□□□ -0.49
CCM2-213ENST00000480658 KDSRQ06136 332 aa12□□□□□ -0.49
CCM2-213ENST00000480658 PDE4CQ08493 712 aa12□□□□□ -0.49
CCM2-213ENST00000480658 MTA1Q13330 715 aa12□□□□□ -0.49
CCM2-213ENST00000480658 LPAL2Q16609 132 aa12□□□□□ -0.49
CCM2-213ENST00000480658 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
CCM2-213ENST00000480658 GAB4Q2WGN9 574 aa12□□□□□ -0.49
CCM2-213ENST00000480658 IL31Q6EBC2 164 aa12□□□□□ -0.49
CCM2-213ENST00000480658 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CCM2-213ENST00000480658 TMEM270Q6UE05 265 aa12□□□□□ -0.49
CCM2-213ENST00000480658 SLC36A4Q6YBV0 504 aa12□□□□□ -0.49
CCM2-213ENST00000480658 Q6ZNB5 142 aa12□□□□□ -0.49
CCM2-213ENST00000480658 ALLCQ8N6M5 410 aa12□□□□□ -0.49
CCM2-213ENST00000480658 MLKLQ8NB16 471 aa12□□□□□ -0.49
CCM2-213ENST00000480658 TXNDC5Q8NBS9 432 aaKnown RBP12□□□□□ -0.49
CCM2-213ENST00000480658 EZH1Q92800 747 aaPredicted RBP12□□□□□ -0.49
CCM2-213ENST00000480658 ELMO3Q96BJ8 720 aa12□□□□□ -0.49
CCM2-213ENST00000480658 HSFY1Q96LI6 401 aa12□□□□□ -0.49
CCM2-213ENST00000480658 ARID3AQ99856 593 aa12□□□□□ -0.49
CCM2-213ENST00000480658 KIAA1468Q9P260 1216 aa12□□□□□ -0.49
CCM2-213ENST00000480658 RASAL2Q9UJF2 1139 aa12□□□□□ -0.49
CCM2-213ENST00000480658 SLC27A6Q9Y2P4 619 aa12□□□□□ -0.49
CCM2-213ENST00000480658 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
CCM2-213ENST00000480658 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 O00370 1275 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 SLC30A4O14863 429 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 IRAK2O43187 625 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 AP5Z1O43299 807 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 TIMM44O43615 452 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 STC2O76061 302 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 KLF8O95600 359 aaPredicted RBP11.99□□□□□ -0.49
CCM2-213ENST00000480658 TBX18O95935 607 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 HOXB2P14652 356 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 CORO1AP31146 461 aaKnown RBP11.99□□□□□ -0.49
CCM2-213ENST00000480658 TIE1P35590 1138 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 MPLP40238 635 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 ACADSBP45954 432 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 ADIGQ0VDE8 80 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 EFEMP1Q12805 493 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 STARD3Q14849 445 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 CNGA2Q16280 664 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 PLK5Q496M5 336 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 CT47A1Q5JQC4 288 aaPredicted RBP11.99□□□□□ -0.49
CCM2-213ENST00000480658 NUGGCQ68CJ6 796 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 ANKS1BQ7Z6G8 1248 aa11.99□□□□□ -0.49
CCM2-213ENST00000480658 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms