RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PAPD7Q5XG87 772 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 PEX26Q7Z412 305 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 RBM23Q86U06 439 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 CPNE8Q86YQ8 564 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 DQX1Q8TE96 717 aaKnown RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 TBCBQ99426 244 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 TRPM5Q9NZQ8 1165 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 PCDHA3Q9Y5H8 950 aa17.58■□□□□ 0.4
SCAMP3-207ENST00000480219 OBSL1O75147 1896 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CAPN9O14815 690 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 DDX3YO15523 660 aaKnown RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 XYLBO75191 536 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 RNF8O76064 485 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 GLP2RO95838 553 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 OLFM2O95897 454 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 FTCDO95954 541 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 F9P00740 461 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 OAS1P00973 400 aaKnown RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 RALAP11233 206 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 RARGP13631 454 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 DESP17661 470 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 PEX5P50542 639 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 PITX1P78337 314 aaPredicted RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 TAF12Q16514 161 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 TCEAL5Q5H9L2 206 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CC2D1AQ6P1N0 951 aaPredicted RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 SYT10Q6XYQ8 523 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CYP4V2Q6ZWL3 525 aaPredicted RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 EDEM1Q92611 657 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 NAPGQ99747 312 aaPredicted RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 PRDM12Q9H4Q4 367 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 SFXN1Q9H9B4 322 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 WDR6Q9NNW5 1121 aaKnown RBP17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CALCOCO1Q9P1Z2 691 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 DNAI1Q9UI46 699 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
SCAMP3-207ENST00000480219 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 CCL16O15467 120 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 IRAK2O43187 625 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 SPOPO43791 374 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 TRUB2O95900 331 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 PTPN2P17706 415 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 MIPP30301 263 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 CDC25CP30307 473 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 RDXP35241 583 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 CXCR3P49682 368 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 SULT1E1P49888 294 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 AIF1P55008 147 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 TAS2R40P59535 323 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 AMPD2Q01433 879 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 CTC1Q2NKJ3 1217 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 SH3PXD2AQ5TCZ1 1133 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 GAREM2Q75VX8 874 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 TAC4Q86UU9 113 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 PSTKQ8IV42 348 aaKnown RBP17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 RHOT1Q8IXI2 618 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 NTAN1Q96AB6 310 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 ASAH2Q9NR71 780 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 HYOU1Q9Y4L1 999 aa17.56■□□□□ 0.4
SCAMP3-207ENST00000480219 ANAPC1Q9H1A4 1944 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 TMEM110-MUSTN1A8MSY1 372 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 M0QYT0 321 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 CES2O00748 559 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 NCK2O43639 380 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 TLR5O60602 858 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 IGLV3-27P01718 113 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 CASQ1P31415 396 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 GTF2F1P35269 517 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 ATP11AP98196 1134 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 ADAM15Q13444 863 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 ADGRE1Q14246 886 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 RPS6KA1Q15418 735 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 PRSS36Q5K4E3 855 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 HECTD3Q5T447 861 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 HS6ST3Q8IZP7 471 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 RNF139Q8WU17 664 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 TEKT4Q8WW24 435 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 SLC39A13Q96H72 371 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 SERPINB11Q96P15 392 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 DNMT3BQ9UBC3 853 aaKnown RBP17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 USP18Q9UMW8 372 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 SNX12Q9UMY4 172 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 DENND4CQ5VZ89 1909 aa17.55■□□□□ 0.4
SCAMP3-207ENST00000480219 CLUHO75153 1309 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 CCDC195A0A1B0GUA6 201 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 MDM4O15151 490 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 MOSPD3O75425 235 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 KRT7P08729 469 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 SRGAP2BP0DMP2 458 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 TCF4P15884 667 aa17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 HOXB8P17481 243 aaPredicted RBP17.54■□□□□ 0.4
SCAMP3-207ENST00000480219 DDX6P26196 483 aaKnown RBP eCLIP17.54■□□□□ 0.42e-7■■■□□ 18.3
SCAMP3-207ENST00000480219 IL1R2P27930 398 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms