RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SLC2A13Q96QE2 648 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
CD46-214ENST00000480003 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 PACSIN1Q9BY11 444 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 PIDD1Q9HB75 910 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 TLR8Q9NR97 1041 aaKnown RBP10.05□□□□□ -0.8
CD46-214ENST00000480003 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.05□□□□□ -0.8
CD46-214ENST00000480003 GMIPQ9P107 970 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 CDH22Q9UJ99 828 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 STRIP2Q9ULQ0 834 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 PCDHA13Q9Y5I0 950 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 UNC80Q8N2C7 3258 aa10.05□□□□□ -0.8
CD46-214ENST00000480003 A0A1W2PRU2 124 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 FAM170AA1A519 330 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 H3BQ06 376 aaPredicted RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 PJA2O43164 708 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 MBTPS2O43462 519 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 OAS1P00973 400 aaKnown RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 LTFP02788 710 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 TMEM253P0C7T8 217 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 MYL4P12829 197 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 GJA1P17302 382 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 PFKLP17858 780 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 RRM1P23921 792 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 WEE1P30291 646 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 TUBP50607 506 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 YWHAZP63104 245 aaKnown RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 IFRD2Q12894 506 aaPredicted RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 SYPL2Q5VXT5 272 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 TXNDC8Q6A555 127 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 PDZD4Q76G19 769 aaPredicted RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 PHLDB2Q86SQ0 1253 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 ARHGEF26Q96DR7 871 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 RIPOR3Q96MK2 946 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 ZNF830Q96NB3 372 aaPredicted RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 SLC6A16Q9GZN6 736 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 RNF38Q9H0F5 515 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 THAP2Q9H0W7 228 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 ATXN3LQ9H3M9 355 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 TASP1Q9H6P5 420 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 SYNCQ9H7C4 482 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 ABCC13Q9NSE7 274 aa10.04□□□□□ -0.8
CD46-214ENST00000480003 CNOT8Q9UFF9 292 aaKnown RBP10.04□□□□□ -0.8
CD46-214ENST00000480003 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 GRAP2O75791 330 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 ENDOD1O94919 500 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 GJB6O95452 261 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 OLFM2O95897 454 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 TBX18O95935 607 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 RALAP11233 206 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 KRT3P12035 628 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 RARGP13631 454 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 KCNA5P22460 613 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 FSHRP23945 695 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.8
CD46-214ENST00000480003 NOS2P35228 1153 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 RPL7AP62424 266 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 KRT83P78385 493 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 SMAD4Q13485 552 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 SPA17Q15506 151 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 TEAD2Q15562 447 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 TOGARAM2Q6ZUX3 1019 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 BNIPLQ7Z465 357 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 DEFB106AQ8N104 65 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 MRPS31Q92665 395 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 CENPIQ92674 756 aaPredicted RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 NECTIN4Q96NY8 510 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 CYP2S1Q96SQ9 504 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 SPSB2Q99619 263 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 LACRTQ9GZZ8 138 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 POMKQ9H5K3 350 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 CCSER2Q9H7U1 834 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 POPDC2Q9HBU9 364 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 PARVAQ9NVD7 372 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 ZMYM5Q9UJ78 669 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 NAALADL1Q9UQQ1 740 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 MRPS23Q9Y3D9 190 aaKnown RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 USP15Q9Y4E8 981 aaPredicted RBP10.03□□□□□ -0.8
CD46-214ENST00000480003 CLUHO75153 1309 aa10.03□□□□□ -0.8
CD46-214ENST00000480003 A0A0A6YYK5 440 aaPredicted RBP10.02□□□□□ -0.81
CD46-214ENST00000480003 BTNL10A8MVZ5 291 aa10.02□□□□□ -0.81
CD46-214ENST00000480003 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
CD46-214ENST00000480003 LCE2BO14633 110 aa10.02□□□□□ -0.81
CD46-214ENST00000480003 COCHO43405 550 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms