RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 NDUFV1P49821 464 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 NR1H3Q13133 447 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 MDH1BQ5I0G3 518 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 FAXCQ5TGI0 409 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 CCDC121Q6ZUS5 278 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 FAM131BQ86XD5 332 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 PALM2Q8IXS6 379 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 C4orf33Q8N1A6 199 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 AGGF1Q8N302 714 aaeCLIP13.52□□□□□ -0.25
SEC13-216ENST00000479868 FAM149B1Q96BN6 582 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 TRABDQ9H4I3 376 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 ACSS3Q9H6R3 686 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 MIOSQ9NXC5 875 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 PAK5Q9P286 719 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 HTTP42858 3142 aa13.52□□□□□ -0.25
SEC13-216ENST00000479868 CHADO15335 359 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 RABGGTBP53611 331 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 WDR4P57081 412 aaKnown RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 RASA2Q15283 850 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 EFHC1Q5JVL4 640 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 OTUD1Q5VV17 481 aaPredicted RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 NUGGCQ68CJ6 796 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CCDC110Q8TBZ0 833 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CSPG4P5Q96PW8 444 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 ZIC5Q96T25 663 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 SENP6Q9GZR1 1112 aaPredicted RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 ETNK2Q9NVF9 386 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 MFHAS1Q9Y4C4 1052 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CFAP69A5D8W1 941 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 FAM155AB1AL88 458 aaPredicted RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 SULT1E1P49888 294 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CLCNKBP51801 687 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 INHBEP58166 350 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 MRPS5P82675 430 aaKnown RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 STRADAQ7RTN6 431 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CCT6BQ92526 530 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 SENP8Q96LD8 212 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 NSRP1Q9H0G5 558 aaKnown RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 PPCSQ9HAB8 311 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 CRTAC1Q9NQ79 661 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 TMPRSS4Q9NRS4 437 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 DDX43Q9NXZ2 648 aaKnown RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 TIMM13Q9Y5L4 95 aaPredicted RBP13.51□□□□□ -0.25
SEC13-216ENST00000479868 TEX264Q9Y6I9 313 aa13.51□□□□□ -0.25
SEC13-216ENST00000479868 SNX3O60493 162 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 KPNA6O60684 536 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 FSBPO95073 299 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 GOT1P17174 413 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 TRIM32Q13049 653 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 ZKSCAN8Q15776 578 aaPredicted RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 ANKS4BQ8N8V4 417 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SGSM3Q96HU1 749 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 MAGEB18Q96M61 343 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 MED10Q9BTT4 135 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 FETUBQ9UGM5 382 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 USP3Q9Y6I4 520 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SYNJ2BP-COX16A0A087WUM0 186 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 GOLGA6L7A0A1B0GV03 622 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 ARL5CA6NH57 179 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 KBTBD13C9JR72 458 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 DNM1LO00429 736 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 PRPF4O43172 522 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC13-216ENST00000479868 DAB1O75553 588 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 ASMTLO95671 621 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 OAS1P00973 400 aaKnown RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 THP07101 528 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 AMPD1P23109 780 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 FOXN2P32314 431 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 RPA3P35244 121 aaPredicted RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 MAP3K7CLP57077 242 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SLC8A3P57103 927 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 YWHAZP63104 245 aaKnown RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 ITIH4Q14624 930 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 NCBP2-AS2Q69YL0 99 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 HFE2Q6ZVN8 426 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SERINC5Q86VE9 423 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SMC6Q96SB8 1091 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
SEC13-216ENST00000479868 PAAF1Q9BRP4 392 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 KRT82Q9NSB4 513 aa13.5□□□□□ -0.25
SEC13-216ENST00000479868 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms