RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PEX11AO75192 247 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ZWINTO95229 277 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ZBED1O96006 694 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 INHBAP08476 426 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 P4HA1P13674 534 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SMPD1P17405 629 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SERPINB3P29508 390 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SDC4P31431 198 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 GMPRP36959 345 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 PPIL2Q13356 520 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 HIC1Q14526 733 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 BZW1Q7L1Q6 419 aaKnown RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC35F5Q8WV83 523 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC44A1Q8WWI5 657 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 OSMRQ99650 979 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 LRMDAQ9H2I8 198 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 MROH8Q9H579 483 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 DENND2DQ9H6A0 471 aaPredicted RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 MARCOQ9UEW3 520 aaPredicted RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 ITGA11Q9UKX5 1188 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 DCTN3O75935 186 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 KITP10721 976 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 CYP2F1P24903 491 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ALDH3A1P30838 453 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 STIP1P31948 543 aaKnown RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC18A1P54219 525 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 IRX4P78413 519 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 CCDC15Q0P6D6 951 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 TP53INP2Q8IXH6 220 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 NUDCD1Q96RS6 583 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 POPDC2Q9HBU9 364 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC5A4Q9NY91 659 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 IL1RAPL1Q9NZN1 696 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ZC3H7BQ9UGR2 993 aaKnown RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 MAD1L1Q9Y6D9 718 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 IKBKGQ9Y6K9 419 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ASB14A6NK59 587 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 A8MXQ7 604 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 CSH1P0DML2 217 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 CSH2P0DML3 217 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 AMPD1P23109 780 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ETV4P43268 484 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 OLIG2Q13516 323 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 DSTYKQ6XUX3 929 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 RAB3IPQ96QF0 476 aaPredicted RBP11.22□□□□□ -0.61
VPS52-217ENST00000478934 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 KCNK13Q9HB14 408 aa11.22□□□□□ -0.61
VPS52-217ENST00000478934 ZNF638Q14966 1978 aaKnown RBP11.21□□□□□ -0.61
VPS52-217ENST00000478934 FAM237BA0A1B0GVD1 139 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 L1CAMP32004 1257 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 NEK3P51956 506 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 TFDP2Q14188 446 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 RASA2Q15283 850 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 TAF11Q15544 211 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 FYB2Q5VWT5 728 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 UNC5AQ6ZN44 842 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 ZNF534Q76KX8 674 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 ALYREFQ86V81 257 aaKnown RBP11.21□□□□□ -0.61
VPS52-217ENST00000478934 FAM131BQ86XD5 332 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 PPTC7Q8NI37 304 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
VPS52-217ENST00000478934 LGMNQ99538 433 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 TSSK1BQ9BXA7 367 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 TMEM120AQ9BXJ8 343 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 FRMD8P1Q9BZ68 369 aaPredicted RBP11.21□□□□□ -0.61
VPS52-217ENST00000478934 KATNBL1Q9H079 304 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 C2CD2Q9Y426 696 aa11.21□□□□□ -0.61
VPS52-217ENST00000478934 E2F8A0AVK6 867 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 HMX2A2RU54 273 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 PDHA1P08559 390 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 GOT1P17174 413 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 ABL2P42684 1182 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 MRPS5P82675 430 aaKnown RBP11.21□□□□□ -0.62
VPS52-217ENST00000478934 ZBTB16Q05516 673 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 ACAP1Q15027 740 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 MROH9Q5TGP6 573 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 SLC9A4Q6AI14 798 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 CATSPER4Q7RTX7 472 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 APBB1IPQ7Z5R6 666 aaPredicted RBP11.21□□□□□ -0.62
VPS52-217ENST00000478934 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.62
VPS52-217ENST00000478934 TMEM110Q86TL2 294 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 TMEM40Q8WWA1 233 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.62
VPS52-217ENST00000478934 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.62
VPS52-217ENST00000478934 CLDN5O00501 218 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 CHADO15335 359 aa11.2□□□□□ -0.62
VPS52-217ENST00000478934 SKIV2L2P42285 1042 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms