RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PAGE2BQ5JRK9 111 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PTRHD1Q6GMV3 140 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 LPCAT2Q7L5N7 544 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ARHGAP22Q7Z5H3 698 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 LGI2Q8N0V4 545 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PROM2Q8N271 834 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 TBC1D16Q8TBP0 767 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RHBDF1Q96CC6 855 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SEPT5Q99719 369 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 ERP44Q9BS26 406 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 DKK3Q9UBP4 350 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 MAP3K5Q99683 1374 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SYNJ1O43426 1573 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PLIN3O60664 434 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 RLN2P04090 185 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ITGA2P17301 1181 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HIBADHP31937 336 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 SFNP31947 248 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 RFC3P40938 356 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ROR1Q01973 937 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PUS10Q3MIT2 529 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 KCTD17Q8N5Z5 321 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SPERTQ8NA61 448 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZSCAN4Q8NAM6 433 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 CYGBQ8WWM9 190 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZFRQ96KR1 1074 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 FEM1AQ9BSK4 669 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ADGRE3Q9BY15 652 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PADI4Q9UM07 663 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ARHGEF10O15013 1369 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 APOL1O14791 398 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 IFNA6P05013 189 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HOXB8P17481 243 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 CFL1P23528 166 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 SLC1A1P43005 524 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 INSCQ1MX18 579 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 UBXN11Q5T124 520 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 STRIP1Q5VSL9 837 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CWF19L1Q69YN2 538 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 NSMFQ6X4W1 530 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CATSPER4Q7RTX7 472 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SLC22A9Q8IVM8 553 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ATPAF2Q8N5M1 289 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 TDRD7Q8NHU6 1098 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 FAM124BQ9H5Z6 455 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 PPP1R14DQ9NXH3 145 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 NOX1Q9Y5S8 564 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 KCNJ18B7U540 433 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PLOD2O00469 737 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 KPNA3O00505 521 aaPredicted RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 CHST10O43529 356 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SGTAO43765 313 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 MT-CO2P00403 227 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ANXA5P08758 320 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 S100PP25815 95 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CNTFP26441 200 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 PCSK1P29120 753 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 STIP1P31948 543 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 KCNJ12Q14500 433 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 TMEM132DQ14C87 1099 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 FAM83EQ2M2I3 478 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZNF284Q2VY69 593 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZMYM1Q5SVZ6 1142 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CCDC81Q6ZN84 652 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 BNIPLQ7Z465 357 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ARHGAP12Q8IWW6 846 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZCCHC7Q8N3Z6 543 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 TMEM35BQ8NCS4 154 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ATP6V1C2Q8NEY4 427 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ZNF671Q8TAW3 534 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 VPS45Q9NRW7 570 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 COMMD8Q9NX08 183 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HAO1Q9UJM8 370 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 KIAA1257Q9ULG3 409 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SYCP2Q9BX26 1530 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 IGSF3O75054 1194 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 GRAP2O75791 330 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 LRG1P02750 347 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 DLATP10515 647 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 PDGFRAP16234 1089 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CTNNB1P35222 781 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 THOP1P52888 689 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 SNRPFP62306 86 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 POLR2LP62875 67 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 PAGE2Q7Z2X7 111 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 ARPINQ7Z6K5 226 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 DNAAF5Q86Y56 855 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 HASPINQ8TF76 798 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 KBTBD7Q8WVZ9 684 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 LPIN2Q92539 896 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 NSL1Q96IY1 281 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 MPP4Q96JB8 637 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 MRPS33Q9Y291 106 aaKnown RBP5.57□□□□□ -1.52
USF3-202ENST00000478658 V9GYQ6 96 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 YEATS2Q9ULM3 1422 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CCDC182A6NF36 153 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 CAPN8A6NHC0 703 aa5.57□□□□□ -1.52
USF3-202ENST00000478658 TCP11X1B4DZS4 312 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms